Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12-
15] 1,151 sequences; 32,239,728 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq179 109 5e-19
>seq179
Length=79788
Score = 109 bits (120), Expect = 5e-19
Identities = 159/220 (72%), Gaps = 10/220 (5%)
Strand=Plus/Minus
Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129
|| ||||||| || || |||||||| || || || || || || | ||| || ||| ||
Sbjct 52384 CGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCG 52325
Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189
|| || ||||| || || || || ||||||||||||||||| | ||| | | ||| |||
Sbjct 52324 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTG 52265
Query 39190 TCCATGAT-TTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCG 39244
||| ||| || || || | ||| | | | || || ||| ||| || || | ||
Sbjct 52264 TCCTGGATCTTGCTCTT--AACGTTGTCGATAGTGTCTGAGCT---CTCGACCTCTAGCG 52210
Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||||| | ||||| ||||| || || |||||||| |||||
Sbjct 52209 TGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 52170
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| ||||| ||| |||||| || || || || |||| || || || |||| ||
Sbjct 51922 ACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCC 51863
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
| ||| ||||| || || ||||||||||||||||||| ||| | || ||| |||||| ||
Sbjct 51862 AACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TG 51804
Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
| | | | | | ||| | | | || || ||||| || || | |||||| | ||
Sbjct 51803 AATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTCTT 51744
Query 39255 TCCCGTCAGCGTTTTAAC 39272
||| ||||| || || ||
Sbjct 51743 TCCGGTCAGGGTCTTGAC 51726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429539574414863
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |