Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq179 109 5e-19 >seq179 Length=79788 Score = 109 bits (120), Expect = 5e-19 Identities = 159/220 (72%), Gaps = 10/220 (5%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || ||||||| || || |||||||| || || || || || || | ||| || ||| || Sbjct 52384 CGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCG 52325 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || ||||| || || || || ||||||||||||||||| | ||| | | ||| ||| Sbjct 52324 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTG 52265 Query 39190 TCCATGAT-TTTCTGTTTGAGCGTCG-CCACCGTATC---GCTCGACTCCACGTCCACCG 39244 ||| ||| || || || | ||| | | | || || ||| ||| || || | || Sbjct 52264 TCCTGGATCTTGCTCTT--AACGTTGTCGATAGTGTCTGAGCT---CTCGACCTCTAGCG 52210 Query 39245 TGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||| | ||||| ||||| || || |||||||| ||||| Sbjct 52209 TGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 52170 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| ||||| ||| |||||| || || || || |||| || || || |||| || Sbjct 51922 ACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCC 51863 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 | ||| ||||| || || ||||||||||||||||||| ||| | || ||| |||||| || Sbjct 51862 AACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC-TG 51804 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 | | | | | | ||| | | | || || ||||| || || | |||||| | || Sbjct 51803 AATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTCTT 51744 Query 39255 TCCCGTCAGCGTTTTAAC 39272 ||| ||||| || || || Sbjct 51743 TCCGGTCAGGGTCTTGAC 51726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429539574414863