Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12-
15] 1,151 sequences; 32,239,728 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq179 104 2e-17
>seq179
Length=79788
Score = 104 bits (114), Expect = 2e-17
Identities = 145/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680
|||| || ||||| || ||||| || ||||||||||| ||||| || | ||||| | |
Sbjct 51724 TCGTCAAGACCCTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCG 51783
Query 23681 A-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739
| || |||| | || | || ||||| || || | || || || || |||||| |
Sbjct 51784 ACAACGTTAAGTCCAAGA-TTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTT 51842
Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAA 23799
|| || |||||||| || |||| |||| || ||| | ||| |||||||| || |||
Sbjct 51843 ATTTTCGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAA 51902
Query 23800 GAGTCCACATTACATTTAGTT 23820
|||||||| |||| || |||
Sbjct 51903 GAGTCCACTCTACACTTGGTT 51923
Score = 84.2 bits (92), Expect = 1e-11
Identities = 139/198 (70%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || ||||| || ||||| || || || || || || || |
Sbjct 51942 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACTATTACACTTGAGGTCGAGTCATCC 52001
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
|||||| | || ||| | || | || | | || || || || | || || |||||
Sbjct 52002 GACACTATCGATAATGTGAAGTCCAAGA-TCCAAGATAAGGAGGGCATTCCTCCCGATCA 52060
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||||| | || || || ||||| || || ||||| | || || | ||| |||||
Sbjct 52061 ACAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAA 52120
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || || |||||
Sbjct 52121 CATCCAGAAGGAATCCAC 52138
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338004858464708
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |