Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12-
15] 1,151 sequences; 32,239,728 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq179 149 1e-30
seq875 104 6e-17
seq1041 95.1 3e-14
seq975 93.3 1e-13
>seq179
Length=79788
Score = 149 bits (164), Expect = 1e-30
Identities = 166/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | |||||||||||||| |||||||| || |||| ||||| |||| | ||
Sbjct 52163 ACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGT 52104
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| |||||||| || |||||||| || || ||||| ||||| ||||| ||
Sbjct 52103 ACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCC 52044
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| ||||||||||| ||||||| ||||| ||||| || | || || || |
Sbjct 52043 CTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACCTCAAG 51984
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || ||||| || | || || | ||| | |||||
Sbjct 51983 TGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 51942
Score = 134 bits (148), Expect = 3e-26
Identities = 154/207 (74%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | || || ||||| || ||| || || |||| ||||| || | | |||
Sbjct 52391 ACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGT 52332
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| || || || |||||||| |||||||||||||| || || ||||| || ||||||||
Sbjct 52331 ACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACC 52272
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| || ||||| ||||||||| | || || ||||
Sbjct 52271 CTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACCTCTAG 52212
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|||||| ||||| || |||| ||| ||
Sbjct 52211 CGTGATAGTCTTTCCGGTCAGAGTCTT 52185
Score = 122 bits (134), Expect = 2e-22
Identities = 141/190 (74%), Gaps = 0/190 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| |||||||| ||||| |||| ||||| |||| || ||| | || ||
Sbjct 51925 AGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCC 51866
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | |||||| || ||||| ||||| || || |||||||| ||||| || ||||||||
Sbjct 51865 TCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCC 51806
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| ||| || ||||||||||| || | || || || | ||||| |||
Sbjct 51805 TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTC 51746
Query 225682 TTGCCCGTCA 225691
|| || ||||
Sbjct 51745 TTTCCGGTCA 51736
>seq875
Length=127222
Score = 104 bits (114), Expect = 6e-17
Identities = 95/120 (79%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || || || || || |||| ||||| || | | ||| | |||||
Sbjct 82326 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 82385
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| ||||||||||| || || ||||||||||| |||||||| |||||||||
Sbjct 82386 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCT 82445
>seq1041
Length=363390
Score = 95.1 bits (104), Expect = 3e-14
Identities = 184/272 (68%), Gaps = 0/272 (0%)
Strand=Plus/Plus
Query 193500 TTCTGGTTGTTCTTTCGACAGATGGCGTCTTTGTAGACGATGAAGGGCATGCCCACCTCC 193559
|||||||| |||| | | ||| || ||||||| |||||||| | || |||
Sbjct 323607 TTCTGGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCG 323666
Query 193560 GCTTGAGCGACGAGAATGTGATGCCAAAGTTCTTGAGCTTTCACTGTCGTTCTGGCCTTT 193619
| || || |||||||| || ||| |||| ||||| || | ||| | | | |
Sbjct 323667 GTCTGGGCCTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGATGGTCTTGCGGCCACGG 323726
Query 193620 CCTTCCCTCTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGA 193679
|| || ||||||||| |||| || | || || || | ||||||| || | ||
Sbjct 323727 CCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGG 323786
Query 193680 CCGGGAGCTTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATG 193739
|||||||| || || ||||| ||||| |||| || || | || || | ||||||
Sbjct 323787 CCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATA 323846
Query 193740 AAGAGGTCAGATGTCCAAATGGCGTAGAAAAG 193771
|||||||| | ||||| | |||||||||||
Sbjct 323847 AAGAGGTCGGGGGTCCACAGAGCGTAGAAAAG 323878
>seq975
Length=109893
Score = 93.3 bits (102), Expect = 1e-13
Identities = 128/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| ||| || || | ||||| || |||||||| || ||||||||
Sbjct 47145 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 47204
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || |||||||| || || || || |||||||| |||||||| ||| || |||
Sbjct 47205 AGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 47264
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|||||||| | || || || | || || ||||| ||||||| || || | |||
Sbjct 47265 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 47323
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192513613518794
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |