Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F000801355.1_202014-12- 15] 1,151 sequences; 32,239,728 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq179 134 1e-26 seq975 87.8 1e-12 >seq179 Length=79788 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| | |||||||||||| || ||||||||||| ||||||||||| || | Sbjct 52396 CCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 52337 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || || |||| ||||||||||| || || ||||| | ||||||||| || | || Sbjct 52336 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 52277 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCAC 44289 | ||| ||||| ||| ||||| ||| || ||| | || ||||| | | || || Sbjct 52276 ATACCCTCCTTGTCCTGGATCTTGCTCTT-AACGTTGTCGATAGTGTCTGAGCTCTCGAC 52218 Query 44290 CTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| | ||| || |||||||| || || ||||| || ||||| ||||| Sbjct 52217 CTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 52170 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| ||||| ||||||||||| |||| |||| || | || || Sbjct 52150 ACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCTTCA 52091 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | |||||| ||||| | ||| | || ||||| || Sbjct 52090 AGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCCTCCTTATCTTGG 52031 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | || ||||||| || || ||||| | ||||| || || Sbjct 52030 ATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACCTCAAGTGTAATAGTTTTG 51971 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| ||||| || ||||| Sbjct 51970 CCAGTGAGCGTCTTGACGAAAATCTGCAT 51942 Score = 107 bits (118), Expect = 1e-18 Identities = 136/187 (73%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || || |||||| ||||||||||| |||| || || |||| ||| Sbjct 51639 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCC 51580 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| |||||||||||||| || || | ||| | ||| ||||| ||| Sbjct 51579 AGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGGATACCCTCCTTGTCCTGG 51520 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | ||||| ||| ||| || ||||| | || || ||||| Sbjct 51519 ATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTG 51460 Query 44309 CCCGTGA 44315 || |||| Sbjct 51459 CCAGTGA 51453 Score = 102 bits (112), Expect = 6e-17 Identities = 144/200 (72%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| ||| || ||||||||||| |||| || || |||| ||| Sbjct 51922 ACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCC 51863 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||| || || | ||||||||| || | || | || ||||| ||| Sbjct 51862 AACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 51803 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| || ||| | |||||||| | || || ||||| | || || ||||| Sbjct 51802 ATCTTGGACTT-AACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTCTT 51744 Query 44308 TCCCGTGAGGGTCTTCACGA 44327 ||| || |||||||| |||| Sbjct 51743 TCCGGTCAGGGTCTTGACGA 51724 >seq975 Length=109893 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||| ||||||||||| ||| || ||| | || || |||||||| ||||| |||| Sbjct 47143 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 47202 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 ||| ||||| || || | || | || ||||| ||| ||||| ||| | | Sbjct 47203 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 47262 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | ||||||||| || || || || | ||||| ||||| ||||| |||||||| |||| Sbjct 47263 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 47322 Query 44328 A 44328 | Sbjct 47323 A 47323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359985350122167