Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq45 125 8e-24
seq49 111 2e-19
>seq45
Length=2363327
Score = 125 bits (138), Expect = 8e-24
Identities = 721/1143 (63%), Gaps = 18/1143 (2%)
Strand=Plus/Plus
Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 53770
|| ||||| || ||||| || ||||||| || | || | || |||||||||||
Sbjct 343729 GAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAC 343788
Query 53771 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 53830
|| ||| | || || || | || | || |||||||| |||| || ||||||
Sbjct 343789 AGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAGGCATCC 343848
Query 53831 TTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACG 53890
|| || || ||||| || ||||||| || |||||| || | ||| || | |||||
Sbjct 343849 TTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGAGT 343908
Query 53891 ACACGAGCCTTTATTATAGATTTGTATCTCTTTTCTCTT--TCGTA--TAGTGTATACAA 53946
||||||| || | || | | ||||| ||||| | | ||| ||
Sbjct 343909 TTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCTTGCTCGTACTTGGCGTA---AA 343963
Query 53947 TCGT-TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCA 54005
| || ||||| || || | |||| ||| || ||| || | || || | |
Sbjct 343964 GGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCAGAAGA 344023
Query 54006 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC-T 54064
| ||| || |||| ||| || || ||||||||||| || || |||| ||||| |
Sbjct 344024 GTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAGAGCGT 344083
Query 54065 ATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 54124
| ||| || || | || | | ||||| || || ||||| |||||||||||
Sbjct 344084 AGAAA-AGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAAT 344142
Query 54125 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTT 54184
| | | ||| | |||||||| |||| ||| || | | | ||||| || |||||
Sbjct 344143 TCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTTA 344202
Query 54185 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 54244
|| ||||| || | || | |||||||| ||| | || | || ||| |||| ||||||
Sbjct 344203 CCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCG 344262
Query 54245 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTG 54302
||||| | || ||||| || || || || | || ||||| | |||
Sbjct 344263 TTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT- 344321
Query 54303 ATAGACCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 54362
||||| || || || || | || ||||| | || || || | ||||||||||
Sbjct 344322 -CAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCATAGA 344380
Query 54363 TGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAC 54422
| ||||| || || ||| | |||||| || || || || | | ||| | |
Sbjct 344381 TACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGGTTGGG 344440
Query 54423 TAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGAT 54482
||| | ||||| || | || || |||||||| || || | || | || | | |
Sbjct 344441 GAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATCAAGT 344500
Query 54483 TGTACGTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTA 54542
||| ||||| || || || || ||| || || || || || |||||||| |
Sbjct 344501 GGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAGCAACACGCATCA 344560
Query 54543 ACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCA 54602
|| |||||| || | ||| | | || ||| || || | ||| || || |
Sbjct 344561 GCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAATCCGAAGGAGGTATGAACGCTCGA 344620
Query 54603 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGA 54662
|| || || || || ||||||| ||||| || ||||| | ||| | |||||||
Sbjct 344621 GGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATTGCCGAGTTGA 344680
Query 54663 GTTTATCCTTATATTTGTTAACTACATCCATGGTAATAC-TTGAAATAATCGGAGAATGT 54721
| | || || || |||| | | ||| || | | |||| || || |||| | |
Sbjct 344681 GCTCCTCGGCATGCTTCATAACAATCT-CATAGTGCTCCTTTGAGATCATAGGAGCAGGC 344739
Query 54722 TTCCCATTTTTAGGATTGACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttt 54781
|| || || || || ||||| | | | ||| || || | ||| | |||
Sbjct 344740 TTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGAGATGACCATAGAGAATTGCTTT 344799
Query 54782 tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGA 54841
||||||| ||||| || || || ||||| || | || || |||||||| || || ||
Sbjct 344800 TTTGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCAGGG 344859
Query 54842 TGT 54844
|||
Sbjct 344860 TGT 344862
>seq49
Length=5411691
Score = 111 bits (122), Expect = 2e-19
Identities = 117/154 (76%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185
|||| || ||| ||||| || ||| || |||||||| | | || | ||||||||
Sbjct 2791074 AACAGCAGACAAGCGAAGTCAGTGTGGAGCCCCTCGTCACGAGAGATCAGCTCGTTGGAG 2791015
Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245
|| ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| |||
Sbjct 2791014 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCA 2790955
Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279
|| ||||| || || || || || || |||||||
Sbjct 2790954 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 2790921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593720538722640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |