Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq39 123 2e-23
seq50 102 7e-17
seq47 87.8 2e-12
>seq39
Length=1271420
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585
|||||||| ||| | || ||| || || |||||||| || | ||| || ||
Sbjct 1240789 CAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTC 1240730
Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645
||| ||||| || |||||| |||| ||||||||||| || || || || |||||||||||
Sbjct 1240729 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTC 1240670
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
|| || ||||| | |||| ||||| | |||||||||||| | || | ||
Sbjct 1240669 CTGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACCTCTAGCGTGATAGT 1240610
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| ||||||||||| || ||||| ||||||||
Sbjct 1240609 CTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 1240577
Score = 113 bits (124), Expect = 4e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||| | || |||||||| || |||||||| ||| || ||| || |||||
Sbjct 1240329 ACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCC 1240270
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
| ||| || || ||| | || ||||||||||| ||||| || |||||||||||||| |
Sbjct 1240269 AACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGA 1240210
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || ||||| | |||| |||||| | ||| ||||||| || | || ||
Sbjct 1240209 ATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTCTTT 1240150
Query 118710 CCGGTCAGAGTTTTTAC 118726
|||||||| || || ||
Sbjct 1240149 CCGGTCAGGGTCTTGAC 1240133
Score = 111 bits (122), Expect = 1e-19
Identities = 147/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || || || || || |||||||| ||| | || || ||| || |||||
Sbjct 1240552 GTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCTTCAAGCTG 1240493
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
|| || ||| ||||||||||||| ||||||||||| ||||||||||| ||| || ||
Sbjct 1240492 CTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCCTCCTTATCTTGGATCTT 1240433
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | |||| ||||| | ||||||||| | || | |||||||| ||
Sbjct 1240432 GGACTTCACATTATCGATAGTGTCGGATGACTCGACCTCAAGTGTAATAGTTTTGCCAGT 1240373
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || |||||||||||
Sbjct 1240372 GAGCGTCTTGACGAAAATCTGCAT 1240349
Score = 95.1 bits (104), Expect = 1e-14
Identities = 132/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589
|||||||||| |||||||| || || |||||||| ||| || ||| || |||||
Sbjct 1240046 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCC 1239987
Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649
||||| || || ||| |||| | |||||| || || ||||| || |||||||||||
Sbjct 1239986 AGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGGATACCCTCCTTGTCCTGG 1239927
Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709
|| || || || | |||| ||| || || ||| ||||| | ||| | || |||
Sbjct 1239926 ATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTG 1239867
Query 118710 CCGGT 118714
|| ||
Sbjct 1239866 CCAGT 1239862
>seq50
Length=3651712
Score = 102 bits (112), Expect = 7e-17
Identities = 134/182 (74%), Gaps = 4/182 (2%)
Strand=Plus/Plus
Query 118551 TTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATG 118610
|| || |||||||| ||||||| ||||| |||||||||||| || || ||| ||||
Sbjct 1677409 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 1677468
Query 118611 AGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGTAATTTTTTGT-TTAACCTGTT 118668
|| ||||| || || || || ||||||||||||| ||| | | || || || || | |
Sbjct 1677469 AGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGA--TCTTGGTCTTGACGTTGT 1677526
Query 118669 CGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAA 118728
||| |||||| | |||||| |||| ||| | || || || ||||| || || || |
Sbjct 1677527 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 1677586
Query 118729 AA 118730
||
Sbjct 1677587 AA 1677588
>seq47
Length=3056837
Score = 87.8 bits (96), Expect = 2e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || |||||||| || | |||||| |||||||||||| || |||
Sbjct 1459047 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCA 1458988
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
||| |||| || ||||| || ||||| || || |||||||||||||
Sbjct 1458987 GCGAAGATCAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCTG 1458942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433829643914956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |