Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq39 125 8e-24 seq50 96.9 4e-15 >seq39 Length=1271420 Score = 125 bits (138), Expect = 8e-24 Identities = 162/220 (74%), Gaps = 8/220 (4%) Strand=Plus/Minus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||||||||||| |||| ||||||||||| || || ||||| || | ||||| || | Sbjct 1240792 ACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCC 1240733 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 ||| || ||||||||||||||||| || || ||||||||||| | || | | |||||| Sbjct 1240732 GTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTT 1240673 Query 43088 GTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTC---GCTCGATTCCACATCGACCG 43143 |||| || | || | | | ||| | | | ||||| |||| || || || | || Sbjct 1240672 GTCC-TGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTC---TCGACCTCTAGCG 1240617 Query 43144 TGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| || || || || || ||||| |||||||| ||||| Sbjct 1240616 TGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 1240577 Score = 89.7 bits (98), Expect = 6e-13 Identities = 151/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || || | || ||| | ||||| || | ||| ||| || || || ||||| || | | Sbjct 1240347 CCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1240288 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || |||| || | |||||| || ||||| || || ||||||||||||| || Sbjct 1240287 AGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGA 1240228 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| | || | | | ||| | | | ||||| || || || Sbjct 1240227 ATGCCCTCCTTGTCC-TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAAC 1240169 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 |||| ||||| || || || || || ||||| || Sbjct 1240168 CTCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGAC 1240133 >seq50 Length=3651712 Score = 96.9 bits (106), Expect = 4e-15 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 42994 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 43053 |||| || || ||||| || ||| || || | || || |||||||| || ||||| | Sbjct 1677407 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 1677466 Query 43054 TGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 43113 | || ||||| ||||| | || | || |||||||||| ||| || |||| ||| | Sbjct 1677467 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGA-CGTTG 1677525 Query 43114 CC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172 | | ||||||||||| || ||||||| || ||||| || ||||| || ||||| || Sbjct 1677526 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 1677585 Query 43173 AA 43174 || Sbjct 1677586 AA 1677587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571816577876040