Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq45 320 1e-82 seq49 125 6e-24 seq39 116 3e-21 >seq45 Length=2363327 Score = 320 bits (354), Expect = 1e-82 Identities = 1210/1882 (64%), Gaps = 28/1882 (1%) Strand=Plus/Plus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 || || || ||||| |||| | | ||| | |||| || || || |||||||| ||| Sbjct 342811 TCGACGGTGAACTGAATGGGGGCGGAGGCGGCCATGGTACGCAGGTAGTACATGCCGGTC 342870 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228 ||||||||||||||||| | || || || || | || || | | ||| Sbjct 342871 TTCAGACCCATCTTCCAGCCAGCGAAGTGCATGCTGGTGAGCTTGCCCATAGTAGGCTCC 342930 Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288 | | || | || | ||||| ||||||||| | || || || ||||||||||| Sbjct 342931 TTAAGGTGGATGTTAAGGGACTGCGACTGATCGATGTAGGCACCGCGGTCGGCGGCCATC 342990 Query 22289 TTTATCAATGTA-CGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAA 22347 | | ||||| ||| || || ||||| |||||||||||||| | |||| || Sbjct 342991 TGCAG-AATGTTGCGCTGGGAGATCTCCCAGACGGTCTTGTACAGGGCCTTGATATCGGC 343049 Query 22348 CGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGT 22407 || || ||| |||||||||| || | | ||||| || || || | Sbjct 343050 GGGGATGTTAGGGATGTTCTGGACGGAACCACCGTCGGCAATGATGCGGTTCTTCATGTT 343109 Query 22408 ATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAA 22467 ||| ||||| |||| || || ||| || | || | ||||||| || || || Sbjct 343110 GTCGGACCACAGGCCGAGATCGACCAGATCCTTCAGGAGCCAAGGGTTCACGACCTGGAA 343169 Query 22468 CTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATT 22527 ||| || | || ||| ||||| ||| ||||| || ||| | || ||||| | || || Sbjct 343170 CTCACCAGCCAGGACACGGCGGGAGTAGATGTTCGAGGTGTAGGGCTCGAAGCACTCGTT 343229 Query 22528 GTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCT 22587 | || || || ||| ||| || || ||||| || || | || || ||| | Sbjct 343230 GAAACCAAGAATTTGACTGGTACTGGCAGTAGGCATAGGAGCGACCAACAGACTGTTGCG 343289 Query 22588 CAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACGGCGT 22647 | || || | ||| || ||| || | ||||||||| ||||||| || || Sbjct 343290 GACACCAGTCTCGGCAATCTTGGCCTTCAGGGAGGCCCAGTCCCAGAGATCGGTGGGAGT 343349 Query 22648 CACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGGCTGCCTTCGTAC 22705 ||||||||| ||||| |||| | ||| |||| || || ||| ||| Sbjct 343350 GCG---GTCCCACATGTCGTACTGCAGGATGCCCTGCGAGACG--GGAGAGCCAGGGTAG 343404 Query 22706 GTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAATAT 22765 || || || ||||| || ||||| ||| || || ||| || |||| || Sbjct 343405 GTCTCATAGGGACCCAGCTTCTTGGCAATATCGGAGGAAGCAGTCAAGGCACCGTGGTAG 343464 Query 22766 ATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCATACGC 22825 || ||||||||||| | |||| | | || || | ||| | |||| |||| Sbjct 343465 ATGGTCTCGAAGATCTGGATGTTGAGCTGTCTCGCCTCGGGGGAATCGAATGGCAGACGC 343524 Query 22826 ATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTTTCAGA 22885 | || ||| || || || | ||| | || || | | |||| || |||| | Sbjct 343525 AGAGCCAGGAAAGCATCAGCAAGACCGTTGACACCAAGAGCGATGGGGCGGTGACGGAAG 343584 Query 22886 TTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCAAGTTT 22945 || | || ||||| || | || || | || ||| || | |||||||||| Sbjct 343585 TTGCTCTTCTTCGCCTCAGGAACGGGGTAGTAGTTGATATCAATGATCTTGTTCAAGTTG 343644 Query 22946 CTGGTC-ACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCC-CG---ATT 23000 || | | || | | | ||||||| || |||| || | Sbjct 343645 -TGAACGAGAACCTGCACGACCTCGTGGAGCTTGCCAAAGTCATACTCGCCTCGGGCAGA 343703 Query 23001 GTACAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGG 23060 || | ||||| || || ||||| || || || ||||| || |||||||| || || Sbjct 343704 GT-CGACAAAGGTGGGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGG 343762 Query 23061 ACGTGTACTCTACAATTTCGGTACATAGATT---GCTACACTTTATCGTGCCCAAATTGC 23117 ||||||| | || || || || || || ||| | || || |||| || Sbjct 343763 CACTGTACTCAATGATCTCAGTGCACAGGTTAGAGCTGCGA---ATAGTACCCAGGTTCT 343819 Query 23118 TCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGA 23177 ||||||| || || | ||||| | |||||||||||||||| | || | || |||||| Sbjct 343820 TCTGGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGG 343879 Query 23178 CCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAACACGTCGCACGTAC-CTG 23236 ||| | ||||| || || ||| | ||||||| | | ||| || | | | Sbjct 343880 TCTGGGCCTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGATG-GTCTTGCGGCCACGG 343938 Query 23237 CCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTA-ACAGTCGGCCAG 23295 || |||| ||||||||| ||| | || || || || | ||||| ||| || ||||| Sbjct 343939 CCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACA-TCAGCCAG 343997 Query 23296 GCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCAT 23355 |||||| | | | || || | ||| |||| || |||||||| |||| Sbjct 343998 GCCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCAT 344057 Query 23356 AAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCC 23415 ||| || || || |||| ||||||||||| || || ||||| || |||||||| || || Sbjct 344058 AAAGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACC 344117 Query 23416 GGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAAC 23475 | |||||| || ||| | || || || || || || ||||||||||| ||||| | Sbjct 344118 GTGGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGAT 344177 Query 23476 GGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTA 23535 ||||| || || || | ||| || || ||||| ||||| || || || |||||||| | Sbjct 344178 AGCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAA 344237 Query 23536 CACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACACT-CGAAC 23594 ||| | ||||| || || | ||||||||| | |||| | || ||| | |||| Sbjct 344238 CACACGCAGCATAGGAACAATACCGTTGGAGGAGCCG-TTGGTTCCACCAATGTAAGAAC 344296 Query 23595 CTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCG 23654 | | || |||| | ||| || | | ||| || || ||| | | || || ||||| | Sbjct 344297 CGGTAGCGCGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGG 344356 Query 23655 CGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGA 23714 | || || ||||| || ||||| |||||||||||||| | | | | |||| || Sbjct 344357 CACAAGTCTTGAGAGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGA 344416 Query 23715 AACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCG 23774 | || || | | || | || ||| |||||||| |||||| || ||| ||||| | Sbjct 344417 AGCAAGATGCAAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGG 344476 Query 23775 TAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATCAATGTCCTCTCCGT 23834 | ||||| | ||||| | | ||| || || ||||| ||||||||||| |||| Sbjct 344477 TGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGT 344536 Query 23835 GTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGACCGTGACGCCGTTAA 23894 | || |||| || || ||||||| || || || || | ||| | | |||||||| Sbjct 344537 GGATGCCGACAGCAACACGCATCAGCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAA 344596 Query 23895 TTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTCATAGTTAAAGTCAC 23954 | | || |||||||| | | || || ||||| || ||| ||||| ||||||| Sbjct 344597 TCCGAAGGAGGTATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCAC 344656 Query 23955 GATCGTGCACTATGGCCGAATT 23976 | |||| ||| || ||||| || Sbjct 344657 GGTCGTACACAATTGCCGAGTT 344678 >seq49 Length=5411691 Score = 125 bits (138), Expect = 6e-24 Identities = 284/421 (67%), Gaps = 16/421 (4%) Strand=Plus/Plus Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || |||||||| ||||| ||||| ||||| || ||| || || | || || ||| || Sbjct 2790923 GCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCTTCCATCTTCTGGCTG 2790982 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||||||||| || || || || ||||||| |||| || || |||||| Sbjct 2790983 AAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTGACGAG 2791042 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGG 58160 || ||||| ||||| || || || || ||| ||||||||| | |||| | | Sbjct 2791043 GGGCTCCACACTGACTTCGCTTGTCTGCTGTTCTCTCACAT----GAACCACCGCCCC-- 2791096 Query 58161 GATCGCA----TCTT--GGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 |||| || | || ||| || || |||||| || | ||||| | ||||| | Sbjct 2791097 GATCCCAAGGTTGTTGAGGAAATCATTGTCGAGGCCGTTGGCATCGAGCAGGAGTTCTTG 2791156 Query 58215 ACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATT 58274 || || || || || || |||| || |||||| | |||||| |||||||| Sbjct 2791157 ACTGACGCTCTTCCCTGCGCTCTGCTTGGCATGAACTCCAAGCTGATGTGCCAGTACATT 2791216 Query 58275 GAGTTTGTTGCCGACAGACTTTTGCTCGAACT--GATTGGAGAGCGTCATTACAACACGA 58332 ||||| || || ||| | || || | | || | ||| || | |||||| | Sbjct 2791217 GAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGA-AGT-ACTACAACTCTG 2791274 Query 58333 AAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGAAA 58392 ||||| || || || ||| | ||||| || | |||||||| ||||| ||||| | Sbjct 2791275 CCAATCCCTTCGACTTCATGGAGTCCATCTCTCTGGCCGGCAAGACCAACTTCTTCGAGA 2791334 Query 58393 A 58393 | Sbjct 2791335 A 2791335 >seq39 Length=1271420 Score = 116 bits (128), Expect = 3e-21 Identities = 149/203 (73%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262 |||| ||||| ||||| || || || ||||| |||| ||||| | || |||| ||| Sbjct 1240131 TCGTCAAGACCCTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCG 1240190 Query 31263 A-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTA 31321 | |||| | | | ||| | ||||||||| ||| | || ||||||||||||||||| Sbjct 1240191 ACAACGTTAAGTCCAAGATTCA-GGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTT 1240249 Query 31322 ATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAA 31381 || ||||| ||||| |||||||| ||| | ||| || ||| || ||||| || ||| Sbjct 1240250 ATTTTCGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAA 1240309 Query 31382 GAATCGACTCTTCATCTGGTACT 31404 || || ||||| || |||| || Sbjct 1240310 GAGTCCACTCTACACTTGGTTCT 1240332 Score = 82.4 bits (90), Expect = 7e-11 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || ||||||||||| || || || ||||| | || || || || Sbjct 1240577 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCA 1240636 Query 31253 GACAGTGTCGA-AACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | |||| |||| | | | ||| | ||||||||| || | || || ||||| Sbjct 1240637 GACACTATCGACAACGTTAAGAGCAAGA-TCCAGGACAAGGAGGGTATTCCCCCTGACCA 1240695 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGAC 31348 ||||||||| || |||||||| || ||| |||| ||| Sbjct 1240696 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGAC 1240732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445765603192560