Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq45 165 1e-35 seq49 127 3e-24 >seq45 Length=2363327 Score = 165 bits (182), Expect = 1e-35 Identities = 733/1148 (64%), Gaps = 16/1148 (1%) Strand=Plus/Plus Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674 |||| || ||||| || ||||| || ||||||| || | || | || || ||| Sbjct 343723 GCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATGATCTCA 343782 Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734 ||||| |||||| | ||| || || | || | || |||||||| |||| || Sbjct 343783 GTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAG 343842 Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 |||||||| || || ||||| || ||||||| || |||| | || | ||| || | | Sbjct 343843 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATAC 343902 Query 79795 CAGACGACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCTT--TCGTATTGTGT 79850 |||| | || ||||||| || | |||| | | ||||| ||||| | | Sbjct 343903 CAGA-GTTTCTGAGCCTTGATGGT---CTTGCGGCCACGGCCCTCTTGCTCGTACTTGGC 343958 Query 79851 ATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACA 79910 || | |||||||| || || | ||||| | | || ||| |||| || || Sbjct 343959 GTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCA 344018 Query 79911 CATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 79970 | | | ||| || || | ||| || || ||||||||||| || || |||| || Sbjct 344019 GAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAG 344078 Query 79971 AGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGA 80029 ||| || ||| || || | || | | |||||| || || ||||| ||||||| Sbjct 344079 AGCGTAGAAA-AGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGA 344137 Query 80030 GGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTT 80089 |||| | | | ||| | |||||||| |||| ||| || || | | || || || | Sbjct 344138 GGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCT 344197 Query 80090 TGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAA 80149 |||| || ||||| || | || | |||||||| ||| | || | || ||| |||| || Sbjct 344198 TGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAA 344257 Query 80150 TACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACT 80207 |||| ||||| | || ||||| || || || || | || ||||| | Sbjct 344258 TACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGA 344317 Query 80208 AATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATC 80267 ||| ||||| || || || || | || ||||| | || || || | ||||| Sbjct 344318 CATT--CAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATC 344375 Query 80268 ATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTG 80327 |||||| ||||| ||||| ||| | |||||| || || || || | | ||| | Sbjct 344376 ATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGG 344435 Query 80328 ACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAG 80387 | ||| | ||||| || | || || |||||||| || || | || | |||| Sbjct 344436 TTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACAT 344495 Query 80388 TAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACG 80447 | | ||| |||||||| || || || ||| || || || || || ||||| Sbjct 344496 CAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAGCAACACG 344555 Query 80448 CATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTT 80507 ||| | || |||||| || | ||| | | || || || | | ||| || Sbjct 344556 CATCAGCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAATCCGAAGGAGGTATGAACG 344615 Query 80508 TTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGA 80567 || | || || || || || ||||||| ||||| || ||||| | ||| |||| Sbjct 344616 CTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATTGCCGA 344675 Query 80568 GTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATAC-TTGAAATAATCGGAG 80626 |||||| | || || || |||| | | ||| ||| | | |||| || || |||| Sbjct 344676 GTTGAGCTCCTCGGCATGCTTCATAACAATCT-CATAGTGCTCCTTTGAGATCATAGGAG 344734 Query 80627 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 80686 | | || || || || || ||||| | | | | ||| || || | ||| Sbjct 344735 CAGGCTTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGAGATGACCATAGAGAATT 344794 Query 80687 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAAT 80746 | |||||||||| |||||| || || || ||||| || | || || | |||||| || | Sbjct 344795 GCTTTTTTGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGT 344854 Query 80747 CTGGATGT 80754 | || ||| Sbjct 344855 CAGGGTGT 344862 >seq49 Length=5411691 Score = 127 bits (140), Expect = 3e-24 Identities = 123/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || ||| ||||| || ||| || |||||||| | | || || |||||||| Sbjct 2791074 AACAGCAGACAAGCGAAGTCAGTGTGGAGCCCCTCGTCACGAGAGATCAGCTCGTTGGAG 2791015 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 2791014 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCA 2790955 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 || |||||||| || || || ||||| |||||||| || Sbjct 2790954 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAACCAG 2790917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718267516094520