Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq39 98.7 8e-16
>seq39
Length=1271420
Score = 98.7 bits (108), Expect = 8e-16
Identities = 163/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941
||| |||||||| | ||||||| || | ||||||||||| || | ||||| || ||
Sbjct 1240804 GCCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 1240745
Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001
| |||||| |||| |||| || || || || || || | ||||| || || | ||
Sbjct 1240744 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGG 1240685
Query 43002 CACACCTTCTTTTTCGCTGATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCG 43059
| ||| || || || |||| ||| || || || | | ||||| ||| ||||
Sbjct 1240684 AATACCCTCCTTGTCCTGGATCTTGCTC-TTAACGTTGTCGATAGTGTC-TGAGCTCTCG 1240627
Query 43060 ACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| |||| ||| ||||| |||||||| ||||| || ||||| || |||||
Sbjct 1240626 ACCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 1240577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381368935344294
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |