Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq45 143 4e-29
seq49 107 3e-18
>seq45
Length=2363327
Score = 143 bits (158), Expect = 4e-29
Identities = 726/1144 (63%), Gaps = 20/1144 (2%)
Strand=Plus/Plus
Query 71704 GATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTATAATTTCAGTG 71760
|| ||||| || ||||| || ||||||| || |||| || | || || ||||||
Sbjct 343729 GAAGCCAGGTTGCAAACAGCCACCTCATCAGG---GGCACTGTACTCAATGATCTCAGTG 343785
Query 71761 CAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 71820
|| || ||| | || || || | || | || |||||||| |||| || |||
Sbjct 343786 CACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAGGCA 343845
Query 71821 TCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAG 71880
||||| || || || || || ||||||| || |||| | || | ||| || | ||||
Sbjct 343846 TCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCAG 343905
Query 71881 ACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTT--TCGTATTGTGTATAT 71937
| | || ||||||| || | || | | | ||||| ||||| | | ||
Sbjct 343906 A-GTTTCTGAGCCTTGATGGTCTTGCGGC--CACGGCCCTCTTGCTCGTACTTGGCGTAA 343962
Query 71938 AATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATC 71997
| |||||||| || || | ||| | | || ||| || || || || |
Sbjct 343963 AGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCAGAAG 344022
Query 71998 AATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 72056
| || ||| || || | | | || || ||||||||||| || || |||| |||||
Sbjct 344023 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAGAGCG 344082
Query 72057 TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 72116
|| ||| || || | || | | |||||| || || ||||| |||||||||||
Sbjct 344083 TAGAAA-AGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAA 344141
Query 72117 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTT 72176
| | | ||| | |||||||| |||| ||| || || | | || || || |||||
Sbjct 344142 TTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTT 344201
Query 72177 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 72236
|| ||||| || | || | |||||||| ||| | || | || ||| |||| ||||||
Sbjct 344202 ACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 344261
Query 72237 ATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATT 72294
||||| | || ||||| || || || || | || ||||| || |||
Sbjct 344262 GTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT 344321
Query 72295 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAG 72354
||||| || || || || | || ||||| | || || || | |||||||||
Sbjct 344322 --CAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCATAG 344379
Query 72355 ATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 72414
|| ||||| || || ||| | |||||| || || || || | | ||| | |
Sbjct 344380 ATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGGTTGG 344439
Query 72415 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGA 72474
||| | ||||| || | || || |||||||| || || | || | |||| |
Sbjct 344440 GGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATCAAG 344499
Query 72475 TTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATT 72534
| ||| |||||||| || || || ||| || || || || || ||||||||
Sbjct 344500 TGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAGCAACACGCATC 344559
Query 72535 AACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCC 72594
| || ||||| || | ||| | | || || || | | ||| || ||
Sbjct 344560 AGCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAATCCGAAGGAGGTATGAACGCTCG 344619
Query 72595 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTG 72654
| || || || || || ||||||| ||||| || ||||| | ||| |||| |||
Sbjct 344620 AGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATTGCCGAGTTG 344679
Query 72655 AGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAATCGGAGAATG 72713
|| | || || || |||| || | ||| ||| | | |||| || || |||| | |
Sbjct 344680 AGCTCCTCGGCATGCTTCATAACAATCT-CATAGTGCTCCTTTGAGATCATAGGAGCAGG 344738
Query 72714 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 72773
|| || || || || ||||| | | | | ||| || || | ||| | ||
Sbjct 344739 CTTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGAGATGACCATAGAGAATTGCTT 344798
Query 72774 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGG 72833
|||||||| |||||| || || || ||||| || | || || |||||||| || || ||
Sbjct 344799 TTTTGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCAGG 344858
Query 72834 ATGT 72837
|||
Sbjct 344859 GTGT 344862
>seq49
Length=5411691
Score = 107 bits (118), Expect = 3e-18
Identities = 116/154 (75%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| || ||| ||||| || ||| || ||||| || | | || | ||||||||
Sbjct 2791074 AACAGCAGACAAGCGAAGTCAGTGTGGAGCCCCTCGTCACGAGAGATCAGCTCGTTGGAG 2791015
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|| ||||| || ||||| ||||||||||| || ||||| || || || || ||||| |||
Sbjct 2791014 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCA 2790955
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209
|| |||||||| || || || || || |||||||
Sbjct 2790954 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 2790921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671138000338680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |