Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq45 125 1e-23 seq47 86.0 9e-12 >seq45 Length=2363327 Score = 125 bits (138), Expect = 1e-23 Identities = 336/510 (66%), Gaps = 8/510 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || || || || || || || | || ||||| |||| || |||||||| || Sbjct 344210 CAGGGTGGTAACAAGCGCCCTGGTGCCTTTGCTATCTACCTGGAGCCGTGGCACGCCGAT 344151 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| |||| || ||| || || |||| || ||| | ||| Sbjct 344150 GTCTTCGAATTCCTCGATCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGTGCCCGTGAC 344091 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACG---ACGGTGGC 97052 | || || || || ||| || || | || ||||||||||| | | |||||| Sbjct 344090 CTTTTCTACGCTCTGTGGACCCCCGACCTCTTTATGAAGCGCGTTGAGGCCAACGGTG-- 344033 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| || | |||||| || | | ||||| ||| | ||| || ||||| ||| Sbjct 344032 -ACTGGACACTCTTCTGCCCCAACGAGGCTCCCGGCCTGGCTGATGTCTACGGCGAGGAG 343974 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171 || || ||| ||| | ||||||||||||||||| || |||| | || | || Sbjct 343973 TTCGATGCCCTTTACGCCAAGTACGAGCAAGAGGGCCGTGGCCGCAAGACCA-TCAAGGC 343915 Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 | |||| ||| | ||||| | ||| ||| |||||||| | || | ||| || Sbjct 343914 TCAGAAACTCTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAACCCCTTCATGCT 343855 Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291 |||||||||| || || | || || ||||| || |||| || || |||| Sbjct 343854 CTACAAGGATGCCTGCAACAGGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGCTC 343795 Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCT 97351 || |||||||| || || | |||||| | || || ||| ||| |||||| || Sbjct 343794 TAACCTGTGCACTGAGATCATTGAGTACAGTGCCCCTGATGAGGTGGCTGTTTGCAACCT 343735 Query 97352 GGCATCGGTCAATCTGCCCAAGTTTGTAGA 97381 ||| || || || |||| ||||| || Sbjct 343734 GGCTTCCCTCGCCCTCCCCACCTTTGTCGA 343705 >seq47 Length=3056837 Score = 86.0 bits (94), Expect = 9e-12 Identities = 79/100 (79%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 70062 AAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATG 70121 |||| |||||||| ||||| ||||| |||||||||||| |||||| ||| || |||||| Sbjct 718921 AAGAAGGCGATCTAGGGCCCGTGTATGGATTCCAGTGGCGGCACTTTGGCGCCGAGTATG 718980 Query 70122 TAGACTGCGAGACAGACTATTCGGGTCAGGGTGTTGATCA 70161 | ||| | |||| || || || || || ||||| || || Sbjct 718981 TCGACGCCAAGACGGATTACTCCGGCCAAGGTGTCGACCA 719020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057875356680