Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq39 98.7 9e-16
>seq39
Length=1271420
Score = 98.7 bits (108), Expect = 9e-16
Identities = 153/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGT--GTTGG 94850
|||||||||| ||||| || ||||| || | ||| || || | ||| || |
Sbjct 1240791 CGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCG 1240732
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||||||||||| || || | ||||| | | ||||| || || |||||||| || |
Sbjct 1240731 --TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCT 1240674
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
|||| | || || ||| ||| | ||| |||||| | | ||||| || | |||||
Sbjct 1240673 TGTCCTGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACCTCTAGCGTGA 1240614
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || ||||| || ||||| || ||||||||||||||
Sbjct 1240613 TAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 1240577
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/187 (71%), Gaps = 4/187 (2%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | |||||| ||||| || | ||| || ||| || ||| ||||||
Sbjct 1240046 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCC 1239987
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || ||| | ||||| || | || || || ||||| ||||| || ||||| |
Sbjct 1239986 AGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGGATACCCTCCTTGTCCTGG 1239927
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTT 94976
|| || | ||||||| | ||| || || || ||| || || |||| |||||||| |
Sbjct 1239926 ATCTTCGACTTGACGTTGTCGATGGTATC-GC-TGGACTCAACCTCAAGGGTGATGGTCT 1239869
Query 94977 TTCCAGT 94983
| |||||
Sbjct 1239868 TGCCAGT 1239862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290398679480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |