Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq45 165 1e-35
seq49 129 7e-25
>seq45
Length=2363327
Score = 165 bits (182), Expect = 1e-35
Identities = 732/1144 (64%), Gaps = 20/1144 (2%)
Strand=Plus/Plus
Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 62957
|| ||||| || ||||| || ||||||| || | || | || |||||||||||
Sbjct 343729 GAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATGATCTCAGTGCAC 343788
Query 62958 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63017
|| ||| | ||||| || | || | || |||||||| |||| || ||||||
Sbjct 343789 AGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAGGCATCC 343848
Query 63018 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63077
|| || || ||||| || ||||||| || |||| | || | ||| || | ||||| |
Sbjct 343849 TTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGA-G 343907
Query 63078 ACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTA--TAGTGTATACA 63132
|| ||||||| || | || | | ||||| ||||| | | ||| |
Sbjct 343908 TTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCTTGCTCGTACTTGGCGTA---A 343962
Query 63133 ATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATC 63191
| | |||||||| || || | |||| ||| || ||| || | || || |
Sbjct 343963 AGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCAGAAG 344022
Query 63192 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 63250
| | ||| || |||| ||| || || ||||||||||| || || |||| |||||
Sbjct 344023 AGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAGAGCG 344082
Query 63251 TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63310
|| ||| || || | || | | ||||| || || ||||| |||||||||||
Sbjct 344083 TAGAAA-AGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAA 344141
Query 63311 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63370
| | | ||| | |||||||| |||| ||| || || | | ||||| || |||||
Sbjct 344142 TTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTGTT 344201
Query 63371 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63430
|| ||||| || | || | |||||||| ||| | || | || ||| |||| ||||||
Sbjct 344202 ACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 344261
Query 63431 GTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATT 63488
||| || || ||||| || || || || | || ||||| | |||
Sbjct 344262 GTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT 344321
Query 63489 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAG 63548
||||| || || || || | || ||||| | || || || | || ||||||
Sbjct 344322 --CAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCATAG 344379
Query 63549 ATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63608
|||||||| ||||| ||| || |||||| || || || || | | ||| | |
Sbjct 344380 ATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGGTTGG 344439
Query 63609 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63668
||| | ||||| || | || || |||||||| || || | || | || | |
Sbjct 344440 GGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTACTTCTGGGACATCAAG 344499
Query 63669 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63728
| ||| |||||||| || || || ||| || || || || || ||||||||
Sbjct 344500 TGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAGCAACACGCATC 344559
Query 63729 AACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63788
| || |||||| || | ||| | | || ||| || | | ||| || ||
Sbjct 344560 AGCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAATCCGAAGGAGGTATGAACGCTCG 344619
Query 63789 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTG 63848
| || || || || || ||||||| ||||| || ||||| | ||| ||||||||
Sbjct 344620 AGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATTGCCGAGTTG 344679
Query 63849 AGTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC-TTGAAATAATCGGAGAATG 63907
|| | || || || |||| || | ||| ||| | | |||| || || |||| | |
Sbjct 344680 AGCTCCTCGGCATGCTTCATAACAATCT-CATAGTGCTCCTTTGAGATCATAGGAGCAGG 344738
Query 63908 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 63967
|| || || || || ||||| | | | | ||| || || | ||| | ||
Sbjct 344739 CTTATTGTTCTTGGGGTTCACATAATGGTAGAGATCGGAGATGACCATAGAGAATTGCTT 344798
Query 63968 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGG 64027
|||||||| |||||| || || || ||||| || | || || |||||||| || || ||
Sbjct 344799 TTTTGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCAGG 344858
Query 64028 ATGT 64031
|||
Sbjct 344859 GTGT 344862
>seq49
Length=5411691
Score = 129 bits (142), Expect = 7e-25
Identities = 121/154 (79%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354
|||| || ||| ||||| || ||| || |||||||| | | || || ||||||||
Sbjct 2791074 AACAGCAGACAAGCGAAGTCAGTGTGGAGCCCCTCGTCACGAGAGATCAGCTCGTTGGAG 2791015
Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414
|| ||||| || ||||| ||||||||||| || ||||| || |||||||||||||| |||
Sbjct 2791014 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCA 2790955
Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33448
|| |||||||| || || || || || |||||||
Sbjct 2790954 GAGAAGAAGATACCCTCGACAGCGGCGAAGGCAA 2790921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946086481880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |