Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq50 98.7 9e-16 seq39 86.0 5e-12 >seq50 Length=3651712 Score = 98.7 bits (108), Expect = 9e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 |||||| |||| |||||| | | |||||||||||| | ||||| ||||| ||| Sbjct 1677560 ATTACCCTCGATGTCGAGTCGAGCGACACCATCGACAACGTCAAGACCAAGATCCAGGAC 1677501 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| || || || |||||| | ||||| | || ||||||||| ||||| ||| Sbjct 1677500 AAGGAGGGCATCCCCCCTGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGAT 1677441 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | | | | | ||||| || ||||| || || Sbjct 1677440 GGCCGCACCCTGAGCGACTACAACATCCAGAA 1677409 >seq39 Length=1271420 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | ||||| ||| | ||||| | || |||||| | | Sbjct 1240349 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACTATTACACTTGAGGTCGAGTCATCC 1240408 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || ||||| || || || ||||| |||||||||||| Sbjct 1240409 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 1240468 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || |||||||| || ||||||| | | | || ||| || ||| Sbjct 1240469 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 1240528 Query 24171 ATTCAAAAAGAATCTAC 24187 || || || ||||| || Sbjct 1240529 ATCCAGAAGGAATCCAC 1240545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935250702165