Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq39 87.8 2e-12
seq50 84.2 2e-11
>seq39
Length=1271420
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || ||| | || ||| | || || ||||| ||
Sbjct 1240349 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACTATTACACTTGAGGTCGAGTCATCC 1240408
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| ||||| || ||| || || || || ||||| || || |||
Sbjct 1240409 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 1240468
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | || || || ||||| || | ||||||| || || | ||| |||||
Sbjct 1240469 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 1240528
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || || |||||||| || ||
Sbjct 1240529 ATCCAGAAGGAATCCACCCTCCA 1240551
>seq50
Length=3651712
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||| |||| ||||| |||| || |||| || |||||| ||||| |||
Sbjct 1677587 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 1677528
Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127
|| | ||| || ||| ||||| || || || || |||||||||||||| |
Sbjct 1677527 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGCCTG 1677468
Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186
|| || |||||||| || | || |||| ||||| || |||| ||||| || || ||
Sbjct 1677467 ATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 1677409
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327244790545
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |