Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq49 138 2e-27
seq48 107 4e-18
seq42 91.5 3e-13
seq45 84.2 4e-11
>seq49
Length=5411691
Score = 138 bits (152), Expect = 2e-27
Identities = 277/405 (68%), Gaps = 12/405 (3%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||||||||| |||||||||||||||||| || |
Sbjct 2791332 TCGAAGAAGTTGGTCTTGCCGGCCAGAGAGATGGACTCCATGAAGTCGAAGGGATTGGCA 2791273
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| ||||| | ||| | ||| || || || | | |||||| || || ||||| |
Sbjct 2791272 GAGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATG 2791213
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | |||||| | ||||||||||||| || | || |||| || ||| | |
Sbjct 2791212 TACTGGCACATCAGCTTGGAGTTCATGCCAAGCAGAGCGCAGGGAAGAGCGTCAGTCAAG 2791153
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCA----CCTGTGCCAGAGA 251798
|| |||| ||| || |||| ||||| | | ||| ||| | | || | | |
Sbjct 2791152 AACTCCTGCTCGATGCCAACGGCCTCGACAATGATTTCCTCAACAACCTTGGGATCGGGG 2791093
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACCCTCG 251856
| | | ||| || | ||| |||| || | || || | || ||| || ||||||
Sbjct 2791092 C-GGTGGTT---CATGTGAGAGAACAGCAGACAAGCGAAGTCAGT--GTGGAGCCCCTCG 2791039
Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916
|| ||| ||| | ||||||||| | | || |||||||||| ||||| ||| | |||
Sbjct 2791038 TCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGC 2790979
Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961
|||||||| | || || |||||||| | | ||||||||||
Sbjct 2790978 CAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 2790934
>seq48
Length=3031725
Score = 107 bits (118), Expect = 4e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 279369 TTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGT 279428
||||| || || || |||| ||||||||||| ||| || | ||| | ||||||||
Sbjct 1527246 TTCTCCCTGGCTTACGGTGCCAAGATTCTGCTGAACCAGACTCACCTGCGCCTCAAGCGT 1527305
Query 279429 GGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCC 279488
|| | || || |||||| |||||||||| || | || |||| ||| || ||||| |||
Sbjct 1527306 GGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTTCCGGAAAGACCACCCTCATGCGTGCC 1527365
Query 279489 ATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCATCTGAGGTAAGGACAGTGTATGTA 279548
||| |||| ||||| || || || || || |||||| | ||| || || ||
Sbjct 1527366 ATTAACAACGAGCAGCTTGAGGGCTTCCCCAAGAAGGATGAGGTCAAGACCGTCTACGTC 1527425
Query 279549 GAGCACGACATCGACTC 279565
|||||||| |||||||
Sbjct 1527426 GAGCACGATCTCGACTC 1527442
>seq42
Length=2243175
Score = 91.5 bits (100), Expect = 3e-13
Identities = 356/558 (64%), Gaps = 14/558 (3%)
Strand=Plus/Minus
Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATG----ATGTGGAGCGTTCTAT 218573
||||||||| ||||||||||||| || ||| ||||| || ||||||| ||
Sbjct 2078236 GACTTCATCAACAAGGAGCTCATCCTGTTCA----GTATGGCGGATAACCAGCGTTCGAT 2078181
Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633
|| ||| |||||||| | |||||| ||||| ||| | || || |||
Sbjct 2078180 CCCTTCCGTTGTGGATGGTTTGAAGCCAGGACAGCGCAAGGTGCTTCACACCTGTTTCCG 2078121
Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693
|| ||||| | || || ||||| | | || | | ||| ||||||||| ||| |
Sbjct 2078120 CCGCAACCTAAAGAAGGACATGAAGGTGGTTGAGCTGGCAGGTCATGTATCCGGAATGAC 2078061
Query 218694 TGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTA 218753
| ||||||||||||||| |||||| | || || || | || ||| ||
Sbjct 2078060 AGCCTACCATCACGGTGATGTCTCCCTGCAGCAGACTATCGTTGGTCTTGCTCAGACCTT 2078001
Query 218754 TGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATT 218813
||| ||| |||||||| |||| ||| |||| || | || ||| ||| ||
Sbjct 2078000 TGTTGGCTCCAACAACATCAACTGCCTGGAGCCCAGTGGAAATTTCGGTAGTCGACTCCA 2077941
Query 218814 GGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCG 218873
||||| ||| |||| ||| | || || | || |||| ||| | | ||
Sbjct 2077940 AGGTGGTGGCGATTGTGCCAGTGCTCGTTACATTTACACTCGCCTGTCTCCCTTTGCACG 2077881
Query 218874 CCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTC 218933
| |||| ||| | ||||||||| || || | ||| || ||||||||
Sbjct 2077880 CAAGGTTTTCCACTCGGCCGATGAACCCCTACTGACGTACAACGAAGACGATGGCAAGAA 2077821
Query 218934 GATTGAGCCCGAGTGGTATGTGCCTGCTATTCC---GTTTTTGCTCGTAAATGGTGCCAA 218990
||||||||||||| | | |||||| | || | ||||| || || ||||| |
Sbjct 2077820 GATTGAGCCCGAGGTCTTTATGCCTGTCGTCCCGATGATTTTGATC---AACGGTGCGGA 2077764
Query 218991 TGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGA 219050
||||||||| || || | ||| || || || |||||||| |||| || | |
Sbjct 2077763 TGGTATCGGAACTGGTTGGAGTTCTTCTATCCCCAACTACAATCCTGAGGATGTCGTGAA 2077704
Query 219051 CAACGTCAAGCGTCTCAT 219068
||| ||||||| || ||
Sbjct 2077703 CAATCTCAAGCGCCTGAT 2077686
>seq45
Length=2363327
Score = 84.2 bits (92), Expect = 4e-11
Identities = 266/410 (65%), Gaps = 3/410 (1%)
Strand=Plus/Plus
Query 294094 CCCTCAGACTCATACTTGGTGTAAAGCTCTTCGTATTCCTTGCCATATACATCAGACAGG 294153
||||| ||| ||||||| |||||| | ||| | |||| ||| || ||||||| ||||
Sbjct 343939 CCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGG 343998
Query 294154 CCAGGGCACTCGTGAGGGTCAAGTAGAGACCACTGGGCATCAGTCTCCACGCGCTTCATG 294213
|| || ||||| ||| | || | ||| | | | | ||| |||||||||||
Sbjct 343999 CCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATA 344058
Query 294214 AATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCACCT 294273
|| || || | ||||| ||||| || | || ||||| || | ||||| |||
Sbjct 344059 AAGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCG 344118
Query 294274 TGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATACACA 294333
|| || || || ||||| || | || |||| || || ||||| || | |
Sbjct 344119 TGGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATA 344178
Query 294334 GCAAAGG-ACC--CCTTCCTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTGTCAAAC 294390
||||||| ||| | || || ||||||| | | ||| | ||| ||| ||||
Sbjct 344179 GCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAAC 344238
Query 294391 ACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCGCGAATCTCAGCCCCG 294450
|| ||||||||| || || || | ||| || |||||||| | ||| | || |||
Sbjct 344239 ACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCG 344298
Query 294451 CGCCCGCGAATGTCGCTCATGTGGAGACCAATGCCACCGCCATACTTGGA 294500
|||||||| | | | ||||| || |||||| | ||||||
Sbjct 344299 GTAGCGCGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGA 344348
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027834916810263
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |