Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq49 138 2e-27 seq48 107 4e-18 seq42 91.5 3e-13 seq45 84.2 4e-11 >seq49 Length=5411691 Score = 138 bits (152), Expect = 2e-27 Identities = 277/405 (68%), Gaps = 12/405 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||||||||| |||||||||||||||||| || | Sbjct 2791332 TCGAAGAAGTTGGTCTTGCCGGCCAGAGAGATGGACTCCATGAAGTCGAAGGGATTGGCA 2791273 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| | ||| | ||| || || || | | |||||| || || ||||| | Sbjct 2791272 GAGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAGCAGGCGGTCAGCGACGAACTCAATG 2791213 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | |||||| | ||||||||||||| || | || |||| || ||| | | Sbjct 2791212 TACTGGCACATCAGCTTGGAGTTCATGCCAAGCAGAGCGCAGGGAAGAGCGTCAGTCAAG 2791153 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCA----CCTGTGCCAGAGA 251798 || |||| ||| || |||| ||||| | | ||| ||| | | || | | | Sbjct 2791152 AACTCCTGCTCGATGCCAACGGCCTCGACAATGATTTCCTCAACAACCTTGGGATCGGGG 2791093 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACCCTCG 251856 | | | ||| || | ||| |||| || | || || | || ||| || |||||| Sbjct 2791092 C-GGTGGTT---CATGTGAGAGAACAGCAGACAAGCGAAGTCAGT--GTGGAGCCCCTCG 2791039 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||| | ||||||||| | | || |||||||||| ||||| ||| | ||| Sbjct 2791038 TCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGC 2790979 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||||||| | || || |||||||| | | |||||||||| Sbjct 2790978 CAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 2790934 >seq48 Length=3031725 Score = 107 bits (118), Expect = 4e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 279369 TTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAACTCTACCCGCCTCAACATCAAGCGT 279428 ||||| || || || |||| ||||||||||| ||| || | ||| | |||||||| Sbjct 1527246 TTCTCCCTGGCTTACGGTGCCAAGATTCTGCTGAACCAGACTCACCTGCGCCTCAAGCGT 1527305 Query 279429 GGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCGGGTAAGAGCACTCTAATGCGCGCC 279488 || | || || |||||| |||||||||| || | || |||| ||| || ||||| ||| Sbjct 1527306 GGTCAGCGTTACGGTCTCCTCGGTCCCAACGGTTCCGGAAAGACCACCCTCATGCGTGCC 1527365 Query 279489 ATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCATCTGAGGTAAGGACAGTGTATGTA 279548 ||| |||| ||||| || || || || || |||||| | ||| || || || Sbjct 1527366 ATTAACAACGAGCAGCTTGAGGGCTTCCCCAAGAAGGATGAGGTCAAGACCGTCTACGTC 1527425 Query 279549 GAGCACGACATCGACTC 279565 |||||||| ||||||| Sbjct 1527426 GAGCACGATCTCGACTC 1527442 >seq42 Length=2243175 Score = 91.5 bits (100), Expect = 3e-13 Identities = 356/558 (64%), Gaps = 14/558 (3%) Strand=Plus/Minus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATG----ATGTGGAGCGTTCTAT 218573 ||||||||| ||||||||||||| || ||| ||||| || ||||||| || Sbjct 2078236 GACTTCATCAACAAGGAGCTCATCCTGTTCA----GTATGGCGGATAACCAGCGTTCGAT 2078181 Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633 || ||| |||||||| | |||||| ||||| ||| | || || ||| Sbjct 2078180 CCCTTCCGTTGTGGATGGTTTGAAGCCAGGACAGCGCAAGGTGCTTCACACCTGTTTCCG 2078121 Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693 || ||||| | || || ||||| | | || | | ||| ||||||||| ||| | Sbjct 2078120 CCGCAACCTAAAGAAGGACATGAAGGTGGTTGAGCTGGCAGGTCATGTATCCGGAATGAC 2078061 Query 218694 TGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTA 218753 | ||||||||||||||| |||||| | || || || | || ||| || Sbjct 2078060 AGCCTACCATCACGGTGATGTCTCCCTGCAGCAGACTATCGTTGGTCTTGCTCAGACCTT 2078001 Query 218754 TGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATT 218813 ||| ||| |||||||| |||| ||| |||| || | || ||| ||| || Sbjct 2078000 TGTTGGCTCCAACAACATCAACTGCCTGGAGCCCAGTGGAAATTTCGGTAGTCGACTCCA 2077941 Query 218814 GGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGTCGCCCGTGACGCG 218873 ||||| ||| |||| ||| | || || | || |||| ||| | | || Sbjct 2077940 AGGTGGTGGCGATTGTGCCAGTGCTCGTTACATTTACACTCGCCTGTCTCCCTTTGCACG 2077881 Query 218874 CCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCTTGAGGACGATGGTTCTTC 218933 | |||| ||| | ||||||||| || || | ||| || |||||||| Sbjct 2077880 CAAGGTTTTCCACTCGGCCGATGAACCCCTACTGACGTACAACGAAGACGATGGCAAGAA 2077821 Query 218934 GATTGAGCCCGAGTGGTATGTGCCTGCTATTCC---GTTTTTGCTCGTAAATGGTGCCAA 218990 ||||||||||||| | | |||||| | || | ||||| || || ||||| | Sbjct 2077820 GATTGAGCCCGAGGTCTTTATGCCTGTCGTCCCGATGATTTTGATC---AACGGTGCGGA 2077764 Query 218991 TGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAATCCCAAGGACATCATTGA 219050 ||||||||| || || | ||| || || || |||||||| |||| || | | Sbjct 2077763 TGGTATCGGAACTGGTTGGAGTTCTTCTATCCCCAACTACAATCCTGAGGATGTCGTGAA 2077704 Query 219051 CAACGTCAAGCGTCTCAT 219068 ||| ||||||| || || Sbjct 2077703 CAATCTCAAGCGCCTGAT 2077686 >seq45 Length=2363327 Score = 84.2 bits (92), Expect = 4e-11 Identities = 266/410 (65%), Gaps = 3/410 (1%) Strand=Plus/Plus Query 294094 CCCTCAGACTCATACTTGGTGTAAAGCTCTTCGTATTCCTTGCCATATACATCAGACAGG 294153 ||||| ||| ||||||| |||||| | ||| | |||| ||| || ||||||| |||| Sbjct 343939 CCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGG 343998 Query 294154 CCAGGGCACTCGTGAGGGTCAAGTAGAGACCACTGGGCATCAGTCTCCACGCGCTTCATG 294213 || || ||||| ||| | || | ||| | | | | ||| ||||||||||| Sbjct 343999 CCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATA 344058 Query 294214 AATAGATCATTGACCCACATTGCGTAAAACAAGTTGCGGGCGCGCAGGCTCTCCTCACCT 294273 || || || | ||||| ||||| || | || ||||| || | ||||| ||| Sbjct 344059 AAGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCG 344118 Query 294274 TGATTACGACGGAGGAGCAGGAAGTCCATGATGTCGGGATGATGGGGTTCCAGATACACA 294333 || || || || ||||| || | || |||| || || ||||| || | | Sbjct 344119 TGGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATA 344178 Query 294334 GCAAAGG-ACC--CCTTCCTGCGTCCCCCCTGGTTGGCGTAGGCAGATGTGGTGTCAAAC 294390 ||||||| ||| | || || ||||||| | | ||| | ||| ||| |||| Sbjct 344179 GCAAAGGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAAC 344238 Query 294391 ACCTTCAGCATAGGCACGATGCCATCGGACTCACCATTGGTTCCGCGAATCTCAGCCCCG 294450 || ||||||||| || || || | ||| || |||||||| | ||| | || ||| Sbjct 344239 ACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCG 344298 Query 294451 CGCCCGCGAATGTCGCTCATGTGGAGACCAATGCCACCGCCATACTTGGA 294500 |||||||| | | | ||||| || |||||| | |||||| Sbjct 344299 GTAGCGCGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGA 344348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027834916810263