Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq39 109 5e-19
seq50 82.4 6e-11
>seq39
Length=1271420
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | || | || | || ||||| || || |||||||| |||
Sbjct 1240578 ATACCACCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCG 1240519
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| ||||||||| || || || ||| |||||||||||||||| || |||
Sbjct 1240518 GAGAGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGA 1240459
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|||||||| || || || ||||| || | | || | ||||||| || |||
Sbjct 1240458 GGAATGCCCTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCG 1240399
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | |||||||| || || || || || |||||||||||
Sbjct 1240398 ACCTCAAGTGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 1240349
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| |||||||| || | | ||| || || | ||||| || || || |||||||| |||
Sbjct 1240067 ATGCCGCCACGGAGGCGAAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCG 1240008
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| ||||||| || || || || || || ||| |||| | |||||||||||| |||
Sbjct 1240007 GACAGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGA 1239948
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| ||||| || | | || | ||| ||| |||| ||
Sbjct 1239947 GGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCA 1239888
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGT 114358
|| || | ||| | || ||||| ||
Sbjct 1239887 ACCTCAAGGGTGATGGTCTTGCCAGT 1239862
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215
|||||||| || | ||| || | || | || || || || |||||||| ||
Sbjct 1240803 CCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 1240744
Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275
| |||||| || || || || ||||||||| |||| |||||||| ||||| || |||
Sbjct 1240743 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 1240684
Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335
|| || || ||||| ||||| || | | || | ||||| | | |||||
Sbjct 1240683 ATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACC 1240624
Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| | || | || || ||||||||||| || ||||| ||||||||
Sbjct 1240623 TCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 1240577
>seq50
Length=3651712
Score = 82.4 bits (90), Expect = 6e-11
Identities = 126/180 (70%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254
|| || |||||||| ||||||| || || ||| || || || || || ||| ||||
Sbjct 1677409 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 1677468
Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314
|| ||||||||||| || || ||||| || ||||| ||||| || | | ||
Sbjct 1677469 AGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 1677528
Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAA 114374
| ||||||| | || ||||| || | ||| | || || || ||||| || || || |||
Sbjct 1677529 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 1677588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420133667784516
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |