Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq49 134 1e-26
seq39 104 2e-17
seq50 96.9 3e-15
>seq49
Length=5411691
Score = 134 bits (148), Expect = 1e-26
Identities = 298/448 (67%), Gaps = 27/448 (6%)
Strand=Plus/Plus
Query 52402 TGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTT 52461
|||| ||||||||| |||||||| | || || || ||| || || ||||||| |
Sbjct 2790918 TGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCTTCCATCTTCT 2790977
Query 52462 ACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCG 52521
| || | | ||| | ||||| || || || ||| ||||||| |||| || || |
Sbjct 2790978 GGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGTG 2791037
Query 52522 ACGAAGGACTGCACACGGACTTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAAT 52581
|||| || || ||||| ||||| || || || | | | | | ||| | |
Sbjct 2791038 ACGAGGGGCTCCACACTGACTTCGCTTGTCTGCTGTTCT---CTCACATGAACCA----- 2791089
Query 52582 TGGATTCGGACACGATCCTGAGCATGTTCAAG-----------GAGGCGGTGGCTATCGA 52630
| | | |||||| || |||| | | ||||| || | |||||
Sbjct 2791090 ------CCGCCCCGATCCCAAGGTTGTTGAGGAAATCATTGTCGAGGCCGTTGGCATCGA 2791143
Query 52631 AAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGTCCAT 52690
||||||| || || | ||| || || || ||||| ||||||||| | || ||
Sbjct 2791144 GCAGGAGTTCTTGACTGACGCTCTTCCCTGCGCTCTGCTTGGCATGAACTCCAAGCTGAT 2791203
Query 52691 GTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCA-AAGT 52749
|||| ||||||| ||||| || || || || ||| ||||| ||||| || | | ||||
Sbjct 2791204 GTGCCAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGG-CAACAAGAAGT 2791262
Query 52750 ACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCA 52809
||| |||| || |||||| || || || ||| | ||| || || | ||||||||||
Sbjct 2791263 ACTACAACTCTGCCAATCCCTTCGACTTCATGGAGTCCATCTCTCTGGCCGGCAAGACCA 2791322
Query 52810 ACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|||| ||||||||||| ||||| || ||
Sbjct 2791323 ACTTCTTCGAGAAGCGTGTCGGTGACTA 2791350
>seq39
Length=1271420
Score = 104 bits (114), Expect = 2e-17
Identities = 163/230 (71%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
|||||| |||| |||||| || | || | | | |||||| || |||||||||||
Sbjct 1240804 GCCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 1240745
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| |||||| |||||| || || ||||| | |||| |||||||| ||||| || ||
Sbjct 1240744 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGG 1240685
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCC 138564
||||| || ||||| || | || | |||| ||| || | ||||| | |||
Sbjct 1240684 AATACCCTCCTTGTC-CTGGATCTTGCTCTTAACGTTG-TCGATAGTGTCTGAGCTCTCG 1240627
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | ||| | || || || |||||||| || ||||| ||||||||
Sbjct 1240626 ACCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 1240577
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
|||||| || | || | ||| || || | | |||||||| || ||||||||||||
Sbjct 1240065 GCCGCCACGGAGGCGAAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 1240006
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
|| |||||| |||||| || || || |||| |||| | |||||||||||| |||||
Sbjct 1240005 CAGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGG 1239946
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| || ||||| ||| || || | | || | ||| ||| | ||||| ||
Sbjct 1239945 GATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAAC 1239886
Query 138567 CTCGACCGTCAGCGTTTTACCAGT 138590
||| | || | || || |||||
Sbjct 1239885 CTCAAGGGTGATGGTCTTGCCAGT 1239862
Score = 89.7 bits (98), Expect = 5e-13
Identities = 152/217 (70%), Gaps = 4/217 (2%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | ||| | ||| || |||| | ||||| || || |||||||||||| |
Sbjct 1240347 CCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1240288
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| |||||| | || || |||| | || |||||||| ||||| || ||
Sbjct 1240287 AGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGA 1240228
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || ||||| ||| | || | |||| ||| || | |||||| | ||||| |
Sbjct 1240227 ATGCCCTCCTTGTC-CTGAATCTTGGACTTAACGTTG-TCGATGGTGTCAGATGACTCAA 1240170
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|||||| || | || || || ||||| || || ||
Sbjct 1240169 CCTCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGAC 1240133
>seq50
Length=3651712
Score = 96.9 bits (106), Expect = 3e-15
Identities = 134/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| || || |||||||| || || |||| |||
Sbjct 1677407 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 1677466
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| || ||||||||||| || || || || || ||||| || | || || || | |||
Sbjct 1677467 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 1677525
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 1677526 -TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 1677584
Query 138603 AAAA 138606
|||
Sbjct 1677585 GAAA 1677588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496261512930960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |