Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq50 98.7 9e-16
seq49 98.7 9e-16
seq39 98.7 9e-16
>seq50
Length=3651712
Score = 98.7 bits (108), Expect = 9e-16
Identities = 132/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || ||||| ||| || ||||| || || ||| |||||
Sbjct 1677409 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 1677468
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
| ||||| || || || || ||||||||||||||| ||| || ||||| |||| ||
Sbjct 1677469 AGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 1677527
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| |||||| | |||||| |||| ||| | || || || ||||| || || || ||
Sbjct 1677528 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 1677587
Query 127105 A 127105
|
Sbjct 1677588 A 1677588
>seq49
Length=5411691
Score = 98.7 bits (108), Expect = 9e-16
Identities = 294/455 (65%), Gaps = 33/455 (7%)
Strand=Plus/Plus
Query 47139 CGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATA 47198
||| || | || |||||| |||||||| |||||||||| ||| || || | ||
Sbjct 2790914 CGTCTGGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCTTCCATC 2790973
Query 47199 TTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCG 47258
|| | |||| | || | ||||| || ||||| || ||||||||| |||||
Sbjct 2790974 TTCTGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCT 2791033
Query 47259 AGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTC---TACTACAACACTA------GA 47309
| ||||| || || ||||| |||| || ||||| | || ||| | |
Sbjct 2791034 CGTGACGAGGGGCTCCACACTGACTTCGCTTGTCTGCTGTTCTCTCACATGAACCACCGC 2791093
Query 47310 GTCGATCAAAAGTTGGACGTGCCCACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATT 47369
||||| ||| | | | | || || ||| ||| ||||| | |||
Sbjct 2791094 CCCGATCCCAAGGTTGTTGAG------------GAAATCATTGTCGAGGCCGTTGGCATC 2791141
Query 47370 GAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATG 47429
||| |||||| || | || ||||| ||| || | | || |||||| | || ||
Sbjct 2791142 GAGCAGGAGTTCTTGACTGACGCTCTTCCCTGCGCTCTGCTTGGCATGAACTCCAAGCTG 2791201
Query 47430 ATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGT-----TCAGCTA-AAGTAT 47483
||| | ||||||| || || ||||| ||||||||||| || || || | |||
Sbjct 2791202 ATGTGCCAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAG--- 2791258
Query 47484 CCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCTCGAGGGC 47543
||| ||| || | | ||||| ||||| || ||| | ||| || || | |||
Sbjct 2791259 ---AAGTACTACAACTCTGCCAATCCCTTCGACTTCATGGAGTCCATCTCTCTGGCCGGC 2791315
Query 47544 AAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578
||||||||||| ||||||||||| ||||| || ||
Sbjct 2791316 AAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 2791350
>seq39
Length=1271420
Score = 98.7 bits (108), Expect = 9e-16
Identities = 117/156 (75%), Gaps = 2/156 (1%)
Strand=Plus/Minus
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || |||||| |||| | |||||||| || || || || |||||||||
Sbjct 1240731 TCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTG 1240672
Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
||| ||| || ||| | ||||| ||| ||||| | |||||||| || | || |
Sbjct 1240671 TCCTGGATCTTGCTCTTAACGTTGT-CGATAGTGTCTGAGCTCTCGACCTCTAGCGTGAT 1240613
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || ||||||||||| || ||||| ||||||||
Sbjct 1240612 AGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 1240577
Score = 95.1 bits (104), Expect = 1e-14
Identities = 134/186 (72%), Gaps = 2/186 (1%)
Strand=Plus/Minus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
||||| || | |||||||| || || || ||||| ||| || || ||| || ||
Sbjct 1240046 ACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCC 1239987
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
||||| || || ||| ||||||| ||||| || || ||||| || |||||||||||| |
Sbjct 1239986 AGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGGATACCCTCCTTGTCCTGG 1239927
Query 127025 ATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
|| ||| ||||| |||| |||| ||| || | ||| || || | ||| | || ||
Sbjct 1239926 ATCTTCGACTTGACGTTG-TCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTT 1239868
Query 127084 GCCGGT 127089
||| ||
Sbjct 1239867 GCCAGT 1239862
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| |||| || | ||||| |||| || |||||||| || || ||||| ||| |
Sbjct 1240347 CCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1240288
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || ||| || || | ||| || || ||| | || | |||||||| ||||| ||
Sbjct 1240287 AGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGA 1240228
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||||||||||||| || || ||| | |||| |||| |||||| | ||| ||
Sbjct 1240227 ATGCCCTCCTTGTCCTGAATCTTGGACTTAACGTTG-TCGATGGTGTCAGATGACTCAAC 1240169
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 127101
|||| || | || || |||||||| || || ||
Sbjct 1240168 CTCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGAC 1240133
Score = 86.0 bits (94), Expect = 6e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || || || || || ||||| ||| | || || ||| || ||||| || ||
Sbjct 1240545 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCTTCAAGCTGCTTGCCT 1240486
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
||| |||| | ||||| ||||||||||| ||||||||||| || ||| || |||
Sbjct 1240485 GCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCCTCCTTATCTTGGATCTTGGACTTC 1240426
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||||| | |||||| || | || | |||||||| || || ||
Sbjct 1240425 ACATTATCGATAGTGTCGGATGACTCGACCTCAAGTGTAATAGTTTTGCCAGTGAGCGTC 1240366
Query 127097 TTTACAAAAATCTGCAT 127113
|| || |||||||||||
Sbjct 1240365 TTGACGAAAATCTGCAT 1240349
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475499950042320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |