Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq45 179 5e-40 seq49 120 4e-22 seq44 93.3 5e-14 >seq45 Length=2363327 Score = 179 bits (198), Expect = 5e-40 Identities = 561/860 (65%), Gaps = 9/860 (1%) Strand=Plus/Plus Query 116425 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 116484 || ||||||| || ||||| || || |||| |||||| || ||||||| || Sbjct 343717 GGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATG 343776 Query 116485 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 116544 || || || |||| || || || ||| || |||| |||||| || || ||| || Sbjct 343777 ATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTG 343836 Query 116545 TTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 116604 || || ||||||||||||||||| | || | || ||||| || |||| || |||||| Sbjct 343837 TTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATG 343896 Query 116605 GCCTTCCATACAT-CGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTT 116663 || | ||| | | | | | || | | || | | | || ||||| | ||||||||| Sbjct 343897 GCATACCAGAGTTTCTGAGCCTTG-ATGGTCTTGCGGCCACGGCCCTCTTGCTCGTACTT 343955 Query 116664 TGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGG 116723 | ||| ||||| || ||||| || || | || | || || || |||| | || Sbjct 343956 GGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTTGGG 344015 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 |||||||| | ||| | ||| ||||||| |||||||| |||||||| ||| |||| Sbjct 344016 GCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGTCCA 344075 Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 || || |||| || || || ||| | || || | || || || |||| || Sbjct 344076 CAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATC 344135 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG 116903 | || || | || ||| ||||||||||| |||||||| | || | | || ||| Sbjct 344136 GAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGGGCG 344195 Query 116904 ---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAAT 116960 |||| |||||| ||||| | || || |||||| || || ||||| |||| Sbjct 344196 CTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAAC 344255 Query 116961 GATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTG 117020 ||||| | || ||| || || || | ||| ||| | | || | | ||| Sbjct 344256 AATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTG 344315 Query 117021 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCC 117080 || | || ||| ||||| || || ||| ||||| || || | ||||| | | Sbjct 344316 GACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATC 344375 Query 117081 GTAGATCCCATCGATCGAGTCA-CCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTG 117139 ||||| || ||||| |||| | || || | | | |||||||| | | || | Sbjct 344376 ATAGATACCCTCGATGCTGTCAGCGCTCATGT-CAACCAGGAAGCAAGATGCAAGCTGGG 344434 Query 117140 GCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGAC 117198 | || ||| | || ||||| || || || | |||||| |||| ||| | |||||| Sbjct 344435 GTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAA-GTACTTCTGGGAC 344493 Query 117199 ATCTTATCGTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACC 117258 ||| | ||| ||||| | | | |||||| || ||||| || |||| | || Sbjct 344494 ATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAGCAACA 344553 Query 117259 CGCATAAACATGTATTGGGG 117278 ||||| | || || ||||| Sbjct 344554 CGCATCAGCAAGTGCTGGGG 344573 >seq49 Length=5411691 Score = 120 bits (132), Expect = 4e-22 Identities = 110/139 (79%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 |||||| ||||||||||| ||||| || || || ||||| ||||| ||||| || || Sbjct 2791051 GTGGAGCCCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCC 2790992 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||||| |||||| || | | |||||||||||||||||||| ||||| ||| Sbjct 2790991 ACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 2790932 Query 127651 CGCGAACGCAAATAGACGC 127669 ||||| |||| |||||| Sbjct 2790931 GGCGAAGGCAACCAGACGC 2790913 >seq44 Length=2810928 Score = 93.3 bits (102), Expect = 5e-14 Identities = 327/503 (65%), Gaps = 27/503 (5%) Strand=Plus/Minus Query 12702 CGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCC 12761 || || || || || || || | |||||| | ||| || | ||| ||||| || | Sbjct 1775836 CGGTCGAATCGTCCGGGACGCATGAGGGCCTTGTCGAGAACATCCGGTCGGTTGGTACCA 1775777 Query 12762 GCGATGACAACGA--TGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAGTTGAT 12819 || | |||||| | ||| || | ||| ||| |||||||||||||| | | || | Sbjct 1775776 GCCAGGACAACCACTTGCTCGGA--GGTATTGAAACCATCCATCTCAGTGAGAATCTGGT 1775719 Query 12820 TGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCACC--CGCACTGCGTTGCT---- 12873 ||| || |||||| ||||| || | |||||| || | | ||||| Sbjct 1775718 TGAGAGTACTTTCACGCTCATCGTTTCC------ACCACCGACGTTCGACTTTGCTCGGG 1775665 Query 12874 ---TACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACGGGCAA 12930 | || | |||||||| || |||||||| | ||| || || || | |||||| Sbjct 1775664 ATTTTCCAATAGCGTCAATCTCATCAATGAAGATGATGCAGGGGGTGTTCTTTCGGGCAT 1775605 Query 12931 CTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG 12990 | |||| ||| || || | || ||||||||| |||||||| || || || | || Sbjct 1775604 TGGCGAAGAGATCGCGGACACGAGAGGGACCGACACCGACAAACATTTCAACGAATTCGG 1775545 Query 12991 --CGGCGGAACATTGGATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAG 13048 | | || || || | ||| || ||| |||||||| || |||| || || | Sbjct 1775544 AACCACTGA-CACTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGCAA 1775487 Query 13049 GGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACGTGGGATCCTGGCACC--A 13106 ||||| || || || || || | ||| | ||||||||| || ||| | ||||| | Sbjct 1775486 TGTCTTACCAGTACCGGGAGGACCTGAGAGGATGGCACCACGGGGAATCTTTGCACCCAA 1775427 Query 13107 CTTCCAAAGTAGCGCTCGGGTTGTTTAAGAAAGTCCACGATTTCTTCCAATTCATCCTTC 13166 |||| | | ||||||||||| | || ||| |||| ||| | ||| |||| Sbjct 1775426 CTTCTCGA--ACCGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTG 1775369 Query 13167 GCGGCGTCGATGCCTTCAACGTC 13189 || |||| ||||| ||||||| Sbjct 1775368 GCCTCGTCCATGCCCGCAACGTC 1775346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506103355880