Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq49 174 2e-38 seq50 123 2e-23 seq39 114 1e-20 seq47 86.0 6e-12 >seq49 Length=5411691 Score = 174 bits (192), Expect = 2e-38 Identities = 204/275 (74%), Gaps = 3/275 (1%) Strand=Plus/Minus Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227 |||||||||||||| || || | || ||||| | ||||||||| || || ||| Sbjct 2790737 TAGGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATCATTATCTGGAAG 2790678 Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287 ||||| ||||| || |||||| ||||| || ||| | ||||||||| || || || Sbjct 2790677 CCGTAGAAGCAACGGGCCTCGGGGACCTGGACCTCTGCACTGAAACGCTCAACGAGGTTC 2790618 Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347 |||||||| || |||||| ||| ||||| |||||||| ||||| |||||| | ||| Sbjct 2790617 TCGTTGACAATACCGTCGGAGGCCGCGAAGAAGGCCAGGACGTGGGAGATGAAGTAACGC 2790558 Query 133348 TCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404 || | |||||||| ||| | ||||||| | |||||||| || || | |||||| Sbjct 2790557 TCATCGTCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGAGAGATCAATCTCCTCA 2790498 Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || || ||||| || |||||||| Sbjct 2790497 GCGGTCCAGAATGAGGCTTCGGCCTTCTTGTACAT 2790463 >seq50 Length=3651712 Score = 123 bits (136), Expect = 2e-23 Identities = 141/186 (76%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| |||| |||||| | | ||||| | | Sbjct 1677587 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 1677528 Query 38313 CA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGC 38370 | |||| | |||| || |||| ||||| ||||| || ||| | ||||||||||| | Sbjct 1677527 GACAACG--TCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCTGACCAACAGCGCC 1677470 Query 38371 TCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAA 38430 | || | ||| ||||| ||||| || || | |||||||| | ||||||||||||||| | Sbjct 1677469 TGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGA 1677410 Query 38431 AGGAAG 38436 ||| || Sbjct 1677409 AGGTAG 1677404 >seq39 Length=1271420 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||| |||||||| || || | || |||||| | || Sbjct 1240349 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAAACTATTACACTTGAGGTCGAGTCATCC 1240408 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || || |||| || || ||||| ||||| |||| ||| Sbjct 1240409 GACACTATCGATAATGTGAAGTCCAAGATCCAAGATAAGGAGGGCATTCCTCCCGATCAA 1240468 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| ||||| ||||| || || | || || ||| |||||||||| Sbjct 1240469 CAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACACTCTCCGACTACAAC 1240528 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| |||||| | || || || | || || ||| Sbjct 1240529 ATCCAGAAGGAATCCACCCTCCACCTTGTCCTCCGT 1240564 Score = 114 bits (126), Expect = 1e-20 Identities = 167/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || || || || ||||| | || |||||| | | Sbjct 1240577 ATGCAGATCTTTGTCAAGACTCTGACCGGAAAGACTATCACGCTAGAGGTCGAGAGCTCA 1240636 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | | || || | ||| ||||| ||||| |||||| | ||||| Sbjct 1240637 GACACTATCGACAACGTTAAGAGCAAGA-TCCAGGACAAGGAGGGTATTCCCCCTGACCA 1240695 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || |||||||| |||| || || || |||||||| Sbjct 1240696 GCAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAA 1240755 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| || ||||| ||||| ||||| || | ||||||| Sbjct 1240756 CATCCAGAAGGAGAGC-ACCCTGCACCTGGTGTTGCGTCTGCGTGGCGGCC 1240805 Score = 105 bits (116), Expect = 7e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324 |||| ||||| ||||||||| | || || ||| ||| ||| | | | | |||| | || Sbjct 1239860 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGACAACG-TCAAG 1239918 Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384 || |||| ||||| ||||| || || | ||||||||||| | || | ||| ||| Sbjct 1239919 TCGAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAACAGCGTTTGATCTTCGCCGGC 1239978 Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444 || |||||||| |||| || || || ||||||||||||||| ||||| | || || Sbjct 1239979 AAGCAGCTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAGGAGTCTACTCTC 1240038 Query 38445 CATTTGGTGCTGCGTTTGAGAGGCGGC 38471 || ||||| || || | | |||||| Sbjct 1240039 CACTTGGTTCTTCGCCTCCGTGGCGGC 1240065 Score = 105 bits (116), Expect = 7e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 38254 TCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGC 38313 |||| || || || || || || || ||||| |||| || ||| | | |||| | | Sbjct 1240131 TCGTCAAGACCCTGACCGGAAAGACTATCACTCTCGAGGTTGAGTCATCTGACACCATCG 1240190 Query 38314 A-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | |||| |||| || || | ||||| ||||| |||||| ||||||| ||||| || Sbjct 1240191 ACAACG-TTAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCCGACCAGCAGCGTCTT 1240249 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 |||| ||| ||||| ||| |||| |||| || || || ||||||||||||||| || Sbjct 1240250 ATTTTCGCCGGCAAGCAGTTGGAGGACGGTCGTACTCTGTCCGACTACAACATCCAGAAA 1240309 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCGT 38459 || | || || || ||||| || ||| Sbjct 1240310 GAGTCCACTCTACACTTGGTTCTCCGT 1240336 >seq47 Length=3056837 Score = 86.0 bits (94), Expect = 6e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| |||||| ||||||||||||| || || | ||| || || ||||| || Sbjct 1458944 GACAAGGAGGGTATTCCCCCCGACCAACAGCGCCTGATCTTCGCTGGTAAGCAGCTCGAG 1459003 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 || | ||||| || |||||||||||||| ||||| |||| || || Sbjct 1459004 GATGGCCGCACTCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCA 1459053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500171905941120