Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq45 217 2e-51 seq44 122 1e-22 seq49 86.0 7e-12 >seq45 Length=2363327 Score = 217 bits (240), Expect = 2e-51 Identities = 543/815 (67%), Gaps = 25/815 (3%) Strand=Plus/Plus Query 110271 GACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGT 110330 |||| | ||||||| || | || || || ||||| |||| ||| || | | | Sbjct 343707 GACAAAGGTGGGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACT 343766 Query 110331 GTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT 110390 ||| || | || || || |||| ||| || || ||| ||||| ||||||||| || Sbjct 343767 GTACTCAATGATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTT 343826 Query 110391 CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGA 110450 || |||||| |||||||| ||||||||| | ||| ||||||| || ||||| | Sbjct 343827 ACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGC 343886 Query 110451 CTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGT--TGCGTTAGCGA-GACCTTC 110507 || ||||||||| | ||| | | || || || |||| || | | || || Sbjct 343887 CTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGATGGTCTTGCG---GCCACGGCCCTC 343943 Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567 | ||||||||||| ||| | | | || || |||| ||||| ||||||| || || Sbjct 343944 TTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGG 344003 Query 110568 CGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCT---CCTCAACCCTCTTCATGAA 110624 |||| || ||| |||||||| | ||| | |||| | ||||||| | |||||| || Sbjct 344004 AGCCTCGTTGGGGCAGAAGAGTGTCCAGT---CACCGTTGGCCTCAACGCGCTTCATAAA 344060 Query 110625 CAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTG 110684 ||||| || |||||| || |||||||||||||| |||| |||| || | ||| || Sbjct 344061 GAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTG 344120 Query 110685 GTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGC 110744 ||| || || || | || || | || ||| | |||||| || || || |||| ||| Sbjct 344121 GTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGC 344180 Query 110745 GATGGATCCCTTACGACG------ACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAA 110798 | || || | | || ||| |||||| ||||||||||| ||| || || Sbjct 344181 AAAGGCACC---AGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAA 344237 Query 110799 GACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTT 110858 || | |||||||||| ||| || | ||| || || || || | ||| || Sbjct 344238 CACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACC 344297 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 | || |||||| ||||| || || ||| |||||||| || ||| || || Sbjct 344298 GGTAGCGCGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGC 344357 Query 110919 AC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 || | ||| |||| ||| |||| ||||| || || || || | || ||| || | Sbjct 344358 ACAAGTCT-TGAGAGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGA 344416 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 ||||||| | | ||| || | || || | |||||||| || || || | || || Sbjct 344417 AGCAAGATGCAAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGG 344476 Query 111038 TGAACAGACCT-TGGGACATCTTGTTGTATGTGTC 111071 |||| || | ||||||||| || |||||| || Sbjct 344477 TGAA-GTACTTCTGGGACATCAAGTGGTATGTCTC 344510 >seq44 Length=2810928 Score = 122 bits (134), Expect = 1e-22 Identities = 281/418 (67%), Gaps = 23/418 (6%) Strand=Plus/Minus Query 11592 GAAACCGTCCATTTCTGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGG 11651 |||||| ||||| || ||||||| |||||||| || ||||||||||||||| Sbjct 1775747 GAAACCATCCATCTCAGTGAGAATCTGGTTGAGAGTACTTTCACGCTCATCGTTTCC--- 1775691 Query 11652 CATACCACCTGCCGAACG-CTTC---------TTACCGACAGCGTCAATCTCATCGATGA 11701 |||||| | || || ||| || || | ||||||||||||||| |||| Sbjct 1775690 ---ACCACC-GACGTTCGACTTTGCTCGGGATTTTCCAATAGCGTCAATCTCATCAATGA 1775635 Query 11702 ATACGATACACGGTTGGTTGGCACGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTC 11761 | | ||| || || ||| || || | |||| || || || ||||| | | Sbjct 1775634 AGATGATGCAGGGGGTGTTCTTTCGGGCATTGGCGAAGAGATCGCGGACACGAGAGGGAC 1775575 Query 11762 CAACACCTACGAACATCTCAACGAAGTTTGCGGCA-GAACACTGAATGAAGGGAACATTA 11820 | ||||| || ||||| |||||||| | | || |||||| | ||| || || | Sbjct 1775574 CGACACCGACAAACATTTCAACGAATTCGGAACCACTGACACTGTA-GAAAGGCACGCCA 1775516 Query 11821 GACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGA 11880 || |||||||| |||| ||| || | |||||||| ||||| || | ||| | ||| Sbjct 1775515 GATTCACCAGCAGTGGCCTTAGCAAGCAATGTCTTACCAGTACCGGGAGGACCTGAGAGG 1775456 Query 11881 AGGGCGCCACGGGGGATCTTGGCACC--ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGA 11938 | ||| |||||||| ||||| ||||| ||||| | | ||||| || | || ||||| Sbjct 1775455 ATGGCACCACGGGGAATCTTTGCACCCAACTTC--TCGAACCGCTCGGGTTGCTGGAGGA 1775398 Query 11939 AGTCCACAATCTCCTCAAGTTCCTCCTTGGCGGAGTCGATACCCTCAACATCGGTGAA 11996 || || | ||| | || ||||||| ||| || ||| |||| |||| ||| Sbjct 1775397 AGCTAACGAATTCCATGATCTCAACCTTGGCCTCGTCCATGCCCGCAACGTCGGAGAA 1775340 >seq49 Length=5411691 Score = 86.0 bits (94), Expect = 7e-12 Identities = 135/192 (70%), Gaps = 5/192 (3%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || ||||| || || |||||||| ||||| || ||| || |||||||| || || Sbjct 2791050 TGGAGCCCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCA 2790991 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||||| | || ||||| |||||||| ||||| ||| | Sbjct 2790990 CGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGCG 2790931 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAGAC----TTGTCGAACCACTTGAGAGC 119683 ||||| || | |||||| ||| || ||| || | | || || ||| || || Sbjct 2790930 GCGAAGGCAACCAGACGCGAAGCGAA-GGTTGACTCACGGTCGTTGATCCAGCGGATGGC 2790872 Query 119684 CCAGTTGGCCTT 119695 |||||||||||| Sbjct 2790871 CCAGTTGGCCTT 2790860 Score = 82.4 bits (90), Expect = 9e-11 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 136716 ATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||| ||||||||||||||| |||||||| |||||||||| ||| |||||||| |||| Sbjct 208561 ATAACTCAGTTGGTTAGAGTGTGGTGCTAATAACGCCAAAGTCGAGGGTTCGACCCCCTC 208502 Query 136776 TGGGAACAGCTTTTAGATATAtttttt 136802 ||| | || ||| ||| |||||||| Sbjct 208501 TGGAACCACGATTTCGAT-TATTTTTT 208476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974947205400