Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq45 257 2e-63 seq44 96.9 4e-15 seq49 84.2 3e-11 >seq45 Length=2363327 Score = 257 bits (284), Expect = 2e-63 Identities = 580/865 (67%), Gaps = 19/865 (2%) Strand=Plus/Plus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || ||||||| || |||| |||||||||||| |||||| | ||||||| | Sbjct 343717 GGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATG 343776 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 || || || |||| ||| || || ||| || |||| ||||| ||||||||||| || Sbjct 343777 ATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTG 343836 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| |||||||||||||||||| |||| | || ||||| ||||| | || |||||| Sbjct 343837 TTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATG 343896 Query 106637 GCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 106692 || | ||| | || | | || | |||| || |||| || ||||| |||||| Sbjct 343897 GCATACCAGAGTTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCTCTTGCTCGTA 343952 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 106752 ||| | ||| ||||| || |||||||| || | || | || || || |||| || Sbjct 343953 CTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTT 344012 Query 106753 TGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 106812 || ||||| || | ||| | ||| ||||||| |||||||| || ||||| || | Sbjct 344013 GGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGT 344072 Query 106813 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 106872 |||||| | | || || || | ||| |||| || | ||| ||||| || | Sbjct 344073 CCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAG 344132 Query 106873 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 106926 || ||||| || | || ||| |||||||| ||||| || |||| || | || Sbjct 344133 ATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGG 344192 Query 106927 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 106986 | ||| | ||| | || | |||||||| || ||| |||||| || || ||||| Sbjct 344193 GCGCTTGTTA---CCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCAT 344249 Query 106987 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 107046 |||| |||||| | || || || || || | ||| ||| | || | | Sbjct 344250 AGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAAT 344309 Query 107047 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 107106 |||| | || || ||||| || || ||| ||||| ||||| | | || Sbjct 344310 GCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAG 344369 Query 107107 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 107166 ||| |||||||||| | ||| ||| | | || | | ||||||||| | | Sbjct 344370 AGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAG 344429 Query 107167 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-T 107225 ||| ||| || ||| | |||||||| || || || | ||||| |||| ||| | | Sbjct 344430 CTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAA-GTACTTCT 344488 Query 107226 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGG 107285 |||||||| || ||||||||| | | | |||||||| || ||||||||||||| | Sbjct 344489 GGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAG 344548 Query 107286 CCACACGCATAAACATGTATTGGGG 107310 | |||||||| | || || ||||| Sbjct 344549 CAACACGCATCAGCAAGTGCTGGGG 344573 >seq44 Length=2810928 Score = 96.9 bits (106), Expect = 4e-15 Identities = 222/326 (68%), Gaps = 14/326 (4%) Strand=Plus/Minus Query 9363 TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 9422 ||||| | || ||||||||||||||||||| || || || || | ||||| | Sbjct 1775662 TTTCCAATAGCGTCAATCTCATCAATGAAGATGATGCAGGGGGTGTTCTTTCGGGCATTG 1775603 Query 9423 TCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG-- 9480 | ||||||||||| || | || || ||||| |||||||| || || || | | Sbjct 1775602 GCGAAGAGATCGCGGACACGAGAGGGACCGACACCGACAAACATTTCAACGAATTCGGAA 1775543 Query 9481 CGGCGGAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9540 | | | ||| || | ||| || || ||||||||| ||| |||| || || | | Sbjct 1775542 CCACTG-ACACTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGCAATG 1775485 Query 9541 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC--ACT 9598 ||||||| ||||| || ||| | ||||| |||||| || |||||||| || || ||| Sbjct 1775484 TCTTACCAGTACCGGGAGGACCTGAGAGGATGGCACCACGGGGAATCTTTGCACCCAACT 1775425 Query 9599 TCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCA--AT-TCATCTTT 9655 || | | | ||| ||||||| ||| || || | ||||| || ||| | || Sbjct 1775424 TC--TCGAACCGCTCGGGTTGCTGGAGGAAGCTAACGA---ATTCCATGATCTCAACCTT 1775370 Query 9656 GGCGGCGTCAATCCCCTCAACATCGG 9681 ||| |||| || ||| |||| |||| Sbjct 1775369 GGCCTCGTCCATGCCCGCAACGTCGG 1775344 >seq49 Length=5411691 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||| ||||| || || || || || || || ||||| || || ||||| || || Sbjct 2791051 GTGGAGCCCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCC 2790992 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||||| ||| | || | |||||| || ||||||||||||||||| ||| Sbjct 2790991 ACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 2790932 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 || || |||| || ||| ||||||| Sbjct 2790931 GGCGAAGGCAACCAGACGCGAAGCGAAGG 2790903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979745409320