Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq45 156 1e-32 seq50 138 3e-27 seq49 87.8 5e-12 >seq45 Length=2363327 Score = 156 bits (172), Expect = 1e-32 Identities = 558/872 (64%), Gaps = 3/872 (0%) Strand=Plus/Plus Query 155628 CTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGG 155687 ||||| || | |||||| |||||||||||| || || || || | ||||||||| Sbjct 343765 CTGTACTCAATGATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGG 343824 Query 155688 TTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGT 155747 ||| || ||||| || ||||||||||| || ||| | ||| | || ||||| |||| Sbjct 343825 TTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGG 343884 Query 155748 GCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCC 155807 || || ||||| |||||| | | || || || |||| | | ||| || Sbjct 343885 GCCTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCT 343944 Query 155808 GACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGG 155867 ||| || || || || | | | ||||| ||||| |||| ||| || || Sbjct 343945 TGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGA 344004 Query 155868 CACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACA 155927 || | |||||| || || | ||| || | || |||| |||||| | Sbjct 344005 GCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGG 344064 Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTC 155987 || | ||| | ||| ||||||||||| | || |||||| | ||||| ||| Sbjct 344065 TCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTC 344124 Query 155988 TTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAA 156047 ||||| || || | |||||| | ||| | || |||||||| || |||||||| Sbjct 344125 TTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAG 344184 Query 156048 CTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCT 156104 |||| | |||| |||||||| || ||||| || || || || || || |||| Sbjct 344185 GCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGC 344244 Query 156105 AGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAG 156164 |||||||||| |||||| ||||| | ||| |||||||| | ||| | ||||| | | | Sbjct 344245 AGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCG 344304 Query 156165 CGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCC 156224 |||| || | || || || |||||||| | || || || || || | Sbjct 344305 CGAATGCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTC 344364 Query 156225 TTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAA 156284 || | ||||| | ||||| || || ||| | ||| | || |||| || Sbjct 344365 TTGAGAGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGAT 344424 Query 156285 CTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATAC 156344 | || ||| | || || | || ||||| || || || | || || | || ||| Sbjct 344425 GCAAGCTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAAGTAC 344484 Query 156345 TTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAG 156404 || | ||||| | | ||||||||| | |||||||| | ||||| || | | Sbjct 344485 TTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCG 344544 Query 156405 ATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGA 156464 | || || | |||| || ||||| || ||||| ||| || | ||| || || Sbjct 344545 ACAGCAACACGCATCAGCAAGTGCTGGGGGCGCTCAGCAACGGTGCCGTTAATCCGAAGG 344604 Query 156465 AGGTATGCGCGTTCCAGAGTTTTAAACCCGAA 156496 ||||||| || || || || || || ||||| Sbjct 344605 AGGTATGAACGCTCGAGGGTCTTGAATCCGAA 344636 >seq50 Length=3651712 Score = 138 bits (152), Expect = 3e-27 Identities = 180/249 (72%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 302595 ACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACC 302654 |||||| || ||||||||| | || || ||||| |||||||| ||||| ||||||| Sbjct 2898263 ACGCTGGATGTAACCAGTTTCGGCAGTCTTGACAGCAGTATCAATCAGACCCTCACGACC 2898204 Query 302655 ACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAAC 302714 | |||| || |||||||| | ||| || | || | || | ||| ||||||| Sbjct 2898203 AGCCATGGCGTGGAAGAAGAACTCAGTAGGAGTCAAGCCACGAAGGTATGAGTTCTCAAC 2898144 Query 302715 GAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTC 302774 ||| ||||| | |||||| || | ||| |||||| ||||| || ||||| | | || Sbjct 2898143 GAATCCACGGGACTCGGGAGAGTAATCGTCCTTGGTGAAGTGAGGAAGGGTACGATACTT 2898084 Query 302775 ATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTG 302834 ||||| | || |||||||| || || ||| ||| ||||||| || | ||||||| Sbjct 2898083 GAAGCCGAACGGAATACGCTTGCCTTCCACGGACTGTTGTCCCACAAGCGCAGTCATCTG 2898024 Query 302835 CGAAATATT 302843 ||||||||| Sbjct 2898023 CGAAATATT 2898015 Score = 107 bits (118), Expect = 6e-18 Identities = 108/140 (77%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | | ||| || |||||| | || ||||| |||||||| ||||||||| Sbjct 2899060 AGAATTTCCTTCAGACGTGGCACACCAAGCGTGACGTT---CTTGGACGACACACCAGCA 2899004 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 ||||||||||| ||||| || | |||||| | |||||||||||| || ||||||| Sbjct 2899003 AAGTGGAAAGTGTTCAGTGTCATTTGAGTCGCGGGCTCACCAATAGACTGGGCCGCAAGA 2898944 Query 301933 ATACCAACCATTTCTCCTGG 301952 | || |||||||| || || Sbjct 2898943 ACGCCGACCATTTCACCAGG 2898924 >seq49 Length=5411691 Score = 87.8 bits (96), Expect = 5e-12 Identities = 127/179 (71%), Gaps = 8/179 (4%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || ||||| | ||||||||||| |||||||| || |||||||| |||||||| || || Sbjct 1560151 GCGCCGTGGGCGATCATACAATCGCGCTCCATCTCTCCGAAACGGAGACCACCGTCACGG 1560210 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600 || | |||||| ||||||| || || || | ||||||| | ||||| Sbjct 1560211 GCACGACCCTCCACAGGCTGGCGGGTAAGGATCTGAGTAGGACCACGAGCACGAGCG--- 1560267 Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 || ||| |||| ||||| || |||||||||||| | | |||||| | ||||| Sbjct 1560268 -TGGATCTTGTCATCCACCATGTGGCGCAGACGCTGGTAGTAGGTGGGACCCAGGAAGA 1560325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471814903354191