Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq45 152 6e-31
seq49 134 2e-25
seq44 113 6e-19
seq43 111 2e-18
>seq45
Length=2363327
Score = 152 bits (168), Expect = 6e-31
Identities = 333/500 (67%), Gaps = 12/500 (2%)
Strand=Plus/Plus
Query 1628099 CGACAAACTTGGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTC--CGTGGGCGA 1628156
||||||| |||| ||||| | | | ||||||||| ||||| || | ||||
Sbjct 343706 CGACAAAGGTGGGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCAC 343765
Query 1628157 CGAAAACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCT 1628215
| | || | |||||| ||||||||||| | | || | ||||||||||||| ||
Sbjct 343766 TGTA--CTCAATGATCTCAGTGCACAGGTTAGAGCTGCGAA-TAGTACCCAGGTTCTTCT 343822
Query 1628216 GGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCT 1628275
|||| | || |||| ||| ||||||| ||||||| |||| || |||||| |||
Sbjct 343823 GGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCT 343882
Query 1628276 GCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGC 1628332
| ||| ||| ||||| |||||| | | || | || ||| ||| | ||||
Sbjct 343883 GGGCCTCGAGAATGGCATACCAGAGTTTCTGAGC---CTTGATGGTCTTGCGGCCACGGC 343939
Query 1628333 CCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGC 1628392
||| || || || |||||||| || |||||
Sbjct 343940 CCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGC 343999
Query 1628393 CGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAA 1628452
|||| |||||| || || ||||| | |||||| || || | | |||| |||||
Sbjct 344000 CGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAA 344059
Query 1628453 AGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGT 1628512
||||||| |||||||| ||||| || ||||| || || || ||||||||| ||||
Sbjct 344060 AGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGT 344119
Query 1628513 GGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGG 1628572
||||||| || ||||| | |||| | |||||||||||||||||||||||| |
Sbjct 344120 GGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAG 344179
Query 1628573 CAAAGGCGCCCTTGCGCTTG 1628592
||||||| || |||||||
Sbjct 344180 CAAAGGCACCAGGGCGCTTG 344199
>seq49
Length=5411691
Score = 134 bits (148), Expect = 2e-25
Identities = 175/242 (72%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 2791359 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGAGAGATG 2791300
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| || |||| | ||||||| ||| | | ||||| | | |
Sbjct 2791299 GACTCCATGAAGTCGAAGGGATTGGCAGAGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 2791240
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||||||||| ||||| ||||| |||||||||||||| || || ||||||||| |
Sbjct 2791239 AGCAGGCGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGAGTTCATGCCAAGC 2791180
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || || || | || ||| ||||| | |||||| | ||||||||||| |||
Sbjct 2791179 AGAGCGCAGGGAAGAGCGTCAGTCAAGAACTCCTGCTCGATGCCAACGGCCTCGACAATG 2791120
Query 868931 AT 868932
||
Sbjct 2791119 AT 2791118
Score = 113 bits (124), Expect = 6e-19
Identities = 179/252 (71%), Gaps = 5/252 (2%)
Strand=Plus/Minus
Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692
|||||||||||||| || |||||||||||||| ||| | |||| | || |||
Sbjct 2790707 GAGTGGATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGGACCTGG 2790648
Query 869693 ACCTCCTTCA-TGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751
||||| | || |||| || | | ||||||||| || || |||||| ||| |||||
Sbjct 2790647 ACCTC-TGCACTGAAACGCTCAACGAGGTTCTCGTTGACAATACCGTCGGAGGCCGCGAA 2790589
Query 869752 AAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTG 869808
|| ||||||||||| ||| |||| ||||| |||||| | | ||| |||||
Sbjct 2790588 GAAGGCCAGGACGTGGGAGATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTC 2790529
Query 869809 GACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868
| || | ||| || | |||||| |||||||||| ||||| |||||||| ||
Sbjct 2790528 GTGAAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAATGAGGCTTCGGCCTTCTT 2790469
Query 869869 GTACATCTCCCA 869880
|||||| | |||
Sbjct 2790468 GTACATTTGCCA 2790457
>seq44
Length=2810928
Score = 113 bits (124), Expect = 6e-19
Identities = 120/157 (76%), Gaps = 1/157 (1%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| || || || || ||||| ||||||||||| | || || ||||||
Sbjct 2446891 GACAGCATCGGTGGAACTGTAACATGCGTAATCCGCAACGTGCCAGTCGGACTGGGCGAG 2446832
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|||||||| || ||| | || ||| ||||| |||||| ||||| ||||| || |||
Sbjct 2446831 CCGTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 2446772
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202
||||| |||||||| ||| ||| || |||| ||||
Sbjct 2446771 AAGGGCTTCGAGATCGGCTCCGGCTTCGGCGGCTGCG 2446735
Score = 91.5 bits (100), Expect = 2e-12
Identities = 213/319 (67%), Gaps = 8/319 (3%)
Strand=Plus/Minus
Query 18099 TGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCC 18158
||||||||| ||| | ||||||||||||| |||| || || ||| || |
Sbjct 2447575 TGGCGAGTCCCACTGTCGCTCCGTCGGCTGCATCGTCGATGGATGTCCTCCGGGCCTAGA 2447516
Query 18159 ACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACT 18218
| | | ||||||||||| ||||| || || |||||||| || ||||| |||| ||
Sbjct 2447515 AATCACTGAGGCCGACATTCAGCCCCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCCT 2447456
Query 18219 TTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCT 18278
| || ||||| ||||| || || ||| |||||||| ||||| ||| |||| |
Sbjct 2447455 CACTACCCCGCGGGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGCGT 2447396
Query 18279 CACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338
||| || ||| | || | | | | | || ||| |||||||| ||| |||||
Sbjct 2447395 CACTCTGGGCACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGTCCCAAGGACTA 2447336
Query 18339 TTCCGACATGTGCAA------GGTGCCGCGGCCCT-CACACGCCGACTACACCTACATGG 18391
| || | ||| || || | ||||| || ||||| | ||||||| |||
Sbjct 2447335 CGGTGGCA-GCACAATGGACCTGTACCCCCGCCCTAGCCATGCCGATTTCACCTACCTGG 2447277
Query 18392 CCAAGTACGGCATCAAGGC 18410
||||||||| |||||||
Sbjct 2447276 AGAAGTACGGCGTCAAGGC 2447258
>seq43
Length=2128823
Score = 111 bits (122), Expect = 2e-18
Identities = 91/111 (82%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| ||||||||| | || |||||| | || || || | || |||||| | || || |||
Sbjct 1779026 GCTGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTCGCTAAC 1778967
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296
||||||||||||||||| || |||||||||||||||||||| |||||| ||
Sbjct 1778966 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGCAAGACCTTCAACATCCAG 1778916
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107127464750331
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |