Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq45 152 6e-31 seq49 134 2e-25 seq44 113 6e-19 seq43 111 2e-18 >seq45 Length=2363327 Score = 152 bits (168), Expect = 6e-31 Identities = 333/500 (67%), Gaps = 12/500 (2%) Strand=Plus/Plus Query 1628099 CGACAAACTTGGGCAGGGCCACGCTGGAAAGGTTGCAAGTCGCCACTTC--CGTGGGCGA 1628156 ||||||| |||| ||||| | | | ||||||||| ||||| || | |||| Sbjct 343706 CGACAAAGGTGGGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCAC 343765 Query 1628157 CGAAAACTGGACGATCTCGGTGCACAGGTTGGC-CGACGTCGTCGTACCCAGGTTCTGCT 1628215 | | || | |||||| ||||||||||| | | || | ||||||||||||| || Sbjct 343766 TGTA--CTCAATGATCTCAGTGCACAGGTTAGAGCTGCGAA-TAGTACCCAGGTTCTTCT 343822 Query 1628216 GGTTGGTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCT 1628275 |||| | || |||| ||| ||||||| ||||||| |||| || |||||| ||| Sbjct 343823 GGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCT 343882 Query 1628276 GCGCCGCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCC-GCG--CGCGGC 1628332 | ||| ||| ||||| |||||| | | || | || ||| ||| | |||| Sbjct 343883 GGGCCTCGAGAATGGCATACCAGAGTTTCTGAGC---CTTGATGGTCTTGCGGCCACGGC 343939 Query 1628333 CCTNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGC 1628392 ||| || || || |||||||| || ||||| Sbjct 343940 CCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGC 343999 Query 1628393 CGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAA 1628452 |||| |||||| || || ||||| | |||||| || || | | |||| ||||| Sbjct 344000 CGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAA 344059 Query 1628453 AGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGT 1628512 ||||||| |||||||| ||||| || ||||| || || || ||||||||| |||| Sbjct 344060 AGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGT 344119 Query 1628513 GGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGG 1628572 ||||||| || ||||| | |||| | |||||||||||||||||||||||| | Sbjct 344120 GGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAG 344179 Query 1628573 CAAAGGCGCCCTTGCGCTTG 1628592 ||||||| || ||||||| Sbjct 344180 CAAAGGCACCAGGGCGCTTG 344199 >seq49 Length=5411691 Score = 134 bits (148), Expect = 2e-25 Identities = 175/242 (72%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 2791359 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGAGAGATG 2791300 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| || |||| | ||||||| ||| | | ||||| | | | Sbjct 2791299 GACTCCATGAAGTCGAAGGGATTGGCAGAGTTGTAGTACTTCTTGTTGCCGAGGGCCACC 2791240 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||||||||| ||||| ||||| |||||||||||||| || || ||||||||| | Sbjct 2791239 AGCAGGCGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGAGTTCATGCCAAGC 2791180 Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930 || || || || | || ||| ||||| | |||||| | ||||||||||| ||| Sbjct 2791179 AGAGCGCAGGGAAGAGCGTCAGTCAAGAACTCCTGCTCGATGCCAACGGCCTCGACAATG 2791120 Query 868931 AT 868932 || Sbjct 2791119 AT 2791118 Score = 113 bits (124), Expect = 6e-19 Identities = 179/252 (71%), Gaps = 5/252 (2%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || |||||||||||||| ||| | |||| | || ||| Sbjct 2790707 GAGTGGATGTTCTCCATCATTATCTGGAAGCCGTAGAAGCAACGGGCCTCGGGGACCTGG 2790648 Query 869693 ACCTCCTTCA-TGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAA 869751 ||||| | || |||| || | | ||||||||| || || |||||| ||| ||||| Sbjct 2790647 ACCTC-TGCACTGAAACGCTCAACGAGGTTCTCGTTGACAATACCGTCGGAGGCCGCGAA 2790589 Query 869752 AAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTG 869808 || ||||||||||| ||| |||| ||||| |||||| | | ||| ||||| Sbjct 2790588 GAAGGCCAGGACGTGGGAGATGAAGTAACGCTCATCGTCGTTCAGGCGGTTGTGCCAGTC 2790529 Query 869809 GACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTT 869868 | || | ||| || | |||||| |||||||||| ||||| |||||||| || Sbjct 2790528 GTGAAGATCCTTGGAGAGATCAATCTCCTCAGCGGTCCAGAATGAGGCTTCGGCCTTCTT 2790469 Query 869869 GTACATCTCCCA 869880 |||||| | ||| Sbjct 2790468 GTACATTTGCCA 2790457 >seq44 Length=2810928 Score = 113 bits (124), Expect = 6e-19 Identities = 120/157 (76%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| || || || || ||||| ||||||||||| | || || |||||| Sbjct 2446891 GACAGCATCGGTGGAACTGTAACATGCGTAATCCGCAACGTGCCAGTCGGACTGGGCGAG 2446832 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 |||||||| || ||| | || ||| ||||| |||||| ||||| ||||| || ||| Sbjct 2446831 CCGTGCTTCGATAAGCTTGAAGCCAAGCTCGGCCACGCGATGCTCAGCATCCCCGCAACC 2446772 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT-TGCGGGTGCG 19202 ||||| |||||||| ||| ||| || |||| |||| Sbjct 2446771 AAGGGCTTCGAGATCGGCTCCGGCTTCGGCGGCTGCG 2446735 Score = 91.5 bits (100), Expect = 2e-12 Identities = 213/319 (67%), Gaps = 8/319 (3%) Strand=Plus/Minus Query 18099 TGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCGCCGTGCATGCC 18158 ||||||||| ||| | ||||||||||||| |||| || || ||| || | Sbjct 2447575 TGGCGAGTCCCACTGTCGCTCCGTCGGCTGCATCGTCGATGGATGTCCTCCGGGCCTAGA 2447516 Query 18159 ACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACT 18218 | | | ||||||||||| ||||| || || |||||||| || ||||| |||| || Sbjct 2447515 AATCACTGAGGCCGACATTCAGCCCCAAATGACCCGGCGCCGTCCCGGCCAAAGCGCCCT 2447456 Query 18219 TTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCT 18278 | || ||||| ||||| || || ||| |||||||| ||||| ||| |||| | Sbjct 2447455 CACTACCCCGCGGGACGAGAAGGACCGAGTCGAGATCCAGTCAGGCACAGAGTTCGGCGT 2447396 Query 18279 CACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTA 18338 ||| || ||| | || | | | | | || ||| |||||||| ||| ||||| Sbjct 2447395 CACTCTGGGCACACCAATTGCCATGGTCGTCCGCAATGAGGACCAGCGTCCCAAGGACTA 2447336 Query 18339 TTCCGACATGTGCAA------GGTGCCGCGGCCCT-CACACGCCGACTACACCTACATGG 18391 | || | ||| || || | ||||| || ||||| | ||||||| ||| Sbjct 2447335 CGGTGGCA-GCACAATGGACCTGTACCCCCGCCCTAGCCATGCCGATTTCACCTACCTGG 2447277 Query 18392 CCAAGTACGGCATCAAGGC 18410 ||||||||| ||||||| Sbjct 2447276 AGAAGTACGGCGTCAAGGC 2447258 >seq43 Length=2128823 Score = 111 bits (122), Expect = 2e-18 Identities = 91/111 (82%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || ||||||||| | || |||||| | || || || | || |||||| | || || ||| Sbjct 1779026 GCTGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTCGCTAAC 1778967 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAG 1592296 ||||||||||||||||| || |||||||||||||||||||| |||||| || Sbjct 1778966 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGCAAGACCTTCAACATCCAG 1778916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107127464750331