Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq45 154 2e-31 seq49 136 6e-26 seq43 114 2e-19 >seq45 Length=2363327 Score = 154 bits (170), Expect = 2e-31 Identities = 270/396 (68%), Gaps = 6/396 (2%) Strand=Plus/Plus Query 2071612 GTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGGC 2071671 || |||||||||| |||||| || || |||| ||| ||||||| |||||| |||| Sbjct 343807 GTACCCAGGTTCTTCTGGTTACTCTTCCTGTTGCAGGCATCCTTGTAGAGCATGAAGGGG 343866 Query 2071672 GCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGAG 2071731 ||| |||||| |||| ||| || ||||| |||| | || | || | | Sbjct 343867 TTACCAGTCTCGGTCTGGGCCTCGAGAATGGCATACCAGAGTTTCTGAGCCTTGAT---G 343923 Query 2071732 GTCCT-CG--CGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCG 2071788 ||| | || | ||||||| | ||||| || || | ||||| Sbjct 343924 GTCTTGCGGCCACGGCCCTCTTGCTCGTACTTGGCGTAAAGGGCATCGAACTCCTCGCCG 343983 Query 2071789 TGGCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTC 2071848 | | || ||||||||| |||||| ||||| ||||| | |||||| ||| | | Sbjct 343984 TAGACATCAGCCAGGCCGGGAGCCTCGTTGGGGCAGAAGAGTGTCCAGTCACCGTTGGCC 344043 Query 2071849 ACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGG 2071908 | ||||| |||||| |||||| |||||||| |||| || || || || || || Sbjct 344044 TCAACGCGCTTCATAAAGAGGTCGGGGGTCCACAGAGCGTAGAAAAGGTCACGGGCACGA 344103 Query 2071909 TTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCAC 2071968 ||||||||| ||||||||||| ||| ||||| | |||| || |||||||||||| Sbjct 344104 ACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAGGAATTCGAAGACATCGGCGTGCCAC 344163 Query 2071969 GGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTG 2072004 |||||||||||| |||||||| || ||||||| Sbjct 344164 GGCTCCAGGTAGATAGCAAAGGCACCAGGGCGCTTG 344199 Score = 109 bits (120), Expect = 9e-18 Identities = 179/258 (69%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||||||||||||||| || |||| |||||| || || ||||| || |||| |||||||| Sbjct 344208 CTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACCGTTGGA 344267 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 ||||||||| || | | ||| | || | ||||| | ||| | | || Sbjct 344268 GGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATTCAGACC 344327 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 ||| || ||||| | ||||||||| | || || | || || || || ||||| ||||| Sbjct 344328 GATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTATCATAGATACCCTC 344387 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 ||| ||| || ||||||| | ||| ||||| || | || || | | || | Sbjct 344388 GATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAGCTGGGGTTGGGGAGTAGC 344447 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 ||||||||| || ||||| Sbjct 344448 GGCATTGAACAGAGTGGG 344465 >seq49 Length=5411691 Score = 136 bits (150), Expect = 6e-26 Identities = 180/250 (72%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950 |||| || ||||| || || || || ||| |||||| |||||||||||||| | | Sbjct 2791367 TGACACCAGCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCGGCCA 2791308 Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010 | ||||| ||||||| | ||| || ||||| | ||||| ||||| | |||| Sbjct 2791307 GAGAGATGGACTCCATGAAGTCGAAGGGATTGGCAGAGTTGTAGTACTTCTTGTTGCCGA 2791248 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | | | ||||||||||| |||||||| ||||||||||||||||| || || ||||| Sbjct 2791247 GGGCCACCAGCAGGCGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGAGTTCA 2791188 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 |||| | || || ||| || | || | | ||||| | |||||| | ||||||| Sbjct 2791187 TGCCAAGCAGAGCGCAGGGAAGAGCGTCAGTCAAGAACTCCTGCTCGATGCCAACGGCCT 2791128 Query 794131 CGATGATGAT 794140 ||| ||||| Sbjct 2791127 CGACAATGAT 2791118 Score = 87.8 bits (96), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 794584 GGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCGATG 794643 || ||||||| |||||||||||||| || ||||||||||| ||||||||||| || || Sbjct 2790749 GGCTCCTTGATATAGGTGTCGATGAGCAGGGAGTAGGTCTCGGAGTGGATGTTCTCCATC 2790690 Query 794644 GCGATCTGGAAGCCATAAAAGCA 794666 ||||||||||| || ||||| Sbjct 2790689 ATTATCTGGAAGCCGTAGAAGCA 2790667 >seq43 Length=2128823 Score = 114 bits (126), Expect = 2e-19 Identities = 134/177 (76%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 ||||||||| || |||||||| ||||| |||||||||||| ||||||| || ||| | | Sbjct 82305 GTACTTGGTCACAGCCTTGGTGCCCTCAGAGACGGCGTGCTTGGCCAGCTCACCGGGGAG 82364 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||||||||| || | |||||||||||| |||| | ||| || |||||| || || Sbjct 82365 GATCAGGCGGACCGAGGTCTGGATCTCCCGGGAGGAGATGGTAGACTTCTTGTT-GTACG 82423 Query 1485591 C-GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGT 1485646 | ||||| | |||||| || ||| || |||| ||||| | ||| ||||||| Sbjct 82424 CAGCCAGCTTGGAGGCCTCCGTAGCGACACGCTCGAAAATGTC-TGGACGAACGAGT 82479 Score = 114 bits (126), Expect = 2e-19 Identities = 92/111 (83%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706 || ||||||||| | || |||||| ||||||| || | || ||||||||||| || ||| Sbjct 1779026 GCTGCCAACTACTTGGATATCAAGGCCCTCCTTGACGTCGGCTGCAAGACCGTCGCTAAC 1778967 Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAG 2035757 | |||||||||||||| || ||||| |||||||||||||| |||||| || Sbjct 1778966 ATGATCAAGGGCAAGTCCCCGGAGGAGATCCGCAAGACCTTCAACATCCAG 1778916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916231188437777