Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq39 125 5e-24
seq50 105 4e-18
seq47 98.7 6e-16
>seq39
Length=1271420
Score = 125 bits (138), Expect = 5e-24
Identities = 153/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||||||| | ||||||||||||||| ||||| |||||||| || | || | || |||
Sbjct 1240785 ACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCC 1240726
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|| ||||| || |||||||| || || |||||||| | || | ||||||||||| |
Sbjct 1240725 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGG 1240666
Query 34889 ATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTT 34948
|| || || ||| | || | || | |||||| || | || || ||||||
Sbjct 1240665 ATCTTGCTCTTAACGTTGTCGATAGTGTCTGAGCTCTCGACCTCTAGCGTGATAGTCTTT 1240606
Query 34949 CCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || ||||| ||||||||||||||
Sbjct 1240605 CCGGTCAGAGTCTTGACAAAGATCTGCAT 1240577
Score = 91.5 bits (100), Expect = 1e-13
Identities = 122/170 (72%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| ||||| || || | || | || ||||| ||||| ||||||||
Sbjct 1240029 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAA 1239970
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||||| || || ||||| | || | ||||||||||| | || || ||||||
Sbjct 1239969 GATCAAACGCTGTTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGACTTGACGTT 1239910
Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGA 34955
| || | || ||| ||| || |||| ||| |||||||| || ||||
Sbjct 1239909 GTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGTGA 1239860
>seq50
Length=3651712
Score = 105 bits (116), Expect = 4e-18
Identities = 132/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
||||||| ||||| ||||| ||| |||| |||| || || ||||| ||||||||||
Sbjct 1677407 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 1677466
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
|||| || || ||||| | || | ||||||||||| | || || ||||||
Sbjct 1677467 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 1677526
Query 34908 CTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAA 34967
| || | || | | ||||||||| | ||| |||||||| ||||| |||||||| || |
Sbjct 1677527 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 1677586
Query 34968 A 34968
|
Sbjct 1677587 A 1677587
>seq47
Length=3056837
Score = 98.7 bits (108), Expect = 6e-16
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| ||||||||| ||||| |||||||| || |||| ||||
Sbjct 1459062 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCATCC 1459003
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| || ||||||||||| || || ||||| | || | |||||||||||
Sbjct 1459002 TCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTC 1458944
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325692232378517
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |