Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq49 149 9e-30 seq45 125 1e-22 seq43 89.7 7e-12 >seq49 Length=5411691 Score = 149 bits (164), Expect = 9e-30 Identities = 218/303 (72%), Gaps = 13/303 (4%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| || |||||||| ||||| || |||||||| |||||| | || | Sbjct 2790453 GATCTGGCAAATGTAC-AAGAAGGCCGAAGCCTCATTCTGGACCGCTGAGGAGATTGATC 2790511 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTC 1455887 || | || |||| ||||| ||| ||| |||||| ||||| | ||| Sbjct 2790512 TCTCCAAGGATCTTCACG----ACTGGCACAACCGCCTGAACGACGATGAGCGTTACTTC 2790567 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 ||| |||||||| ||||| || ||| ||| ||| || || || ||||||||| | Sbjct 2790568 ATCTCCCACGTCCTGGCCTTCTT-CGCGGCCTCCGACGGTATTGTCAACGAGAACCTCGT 2790626 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | ||||||||| | || ||||| |||| || ||||| |||||||| Sbjct 2790627 TGAGCGTTTCAGTGCAGAGGTCCAGGTCCCCGAGGCCCGTTGCTTCTACGGCTTCCAGAT 2790686 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 || || ||||||||||| || |||||||| || || ||||||||||| ||||||| Sbjct 2790687 AATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCATCGACACCTATATCAAGGA 2790746 Query 1456068 CCC 1456070 || Sbjct 2790747 GCC 2790749 Score = 129 bits (142), Expect = 8e-24 Identities = 187/259 (72%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 ||||| ||||||||||| | |||||| | ||||| | | || | || || || Sbjct 2791118 ATCATTGTCGAGGCCGTTGGCATCGAGCAGGAGTTCTTGACTGACGCTCTTCCCTGCGCT 2791177 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | ||||||||| ||| ||| ||||||||||||||||| || ||||| ||||||| Sbjct 2791178 CTGCTTGGCATGAACTCCAA-GCTGATGTGCCAGTACATTGAGTTC-GTCGCTGACCGCC 2791235 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 |||| | ||| |||||| | ||||| ||||| | ||||| || ||| | ||| Sbjct 2791236 TGCTGGTGGCCCTCGGCAACA-AGAAGTACTACAACTCTGCCAATCCCTTCGACTTCATG 2791294 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACGCC 1456761 |||| ||||| || | |||||||||||||| |||||| || || || || ||| Sbjct 2791295 GAGTCCATCTCTCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTACCAG 2791354 Query 1456762 AAGGCCGGCGTCACCGCCA 1456780 ||||| || |||| |||| Sbjct 2791355 AAGGCTGGTGTCATGGCCA 2791373 >seq45 Length=2363327 Score = 125 bits (138), Expect = 1e-22 Identities = 289/435 (66%), Gaps = 16/435 (4%) Strand=Plus/Minus Query 261796 CAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTG 261855 ||||||| || |||||||| ||||||||| |||||||||||||| || || | | Sbjct 344199 CAAGCGCCCTGGTGCCTTTGCTATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAATT 344140 Query 261856 GCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTT 261915 || || || ||||||||||| || ||||| || | || || || || || Sbjct 344139 CCTCGATCTGCGGAAGAACCACGGTAA-GGAGGAGG-----TTCGTGCCCGTGACCTTTT 344086 Query 261916 TTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTC 261975 |||| |||||||| |||||| |||||| ||| | | | || | | |||||| | Sbjct 344085 CTACGCTCTGTGGACCCCCGACCTCTTTATGAAGCGCGTTGAGGCCAACGGTGACTGGAC 344026 Query 261976 GCTCTTTTGCCCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGC 262035 ||||| ||||| |||||| ||||||||| || ||| |||| || || || || Sbjct 344025 ACTCTTCTGCCCCAACGAGGCTCCCGGCCTGGCTGATGTCTACGGCGAGGAGTTCGATGC 343966 Query 262036 CCTCTATG--AGNNNNNNNNNNNNNNNNNNNNNNCGC-GGACCGTCGTGCCCGCACGACA 262092 ||| || | | ||| |||| || | || | | Sbjct 343965 CCTTTACGCCAAGTACGAGCAAGAGGGCCGTGGCCGCAAGACCATCAAG---GCTCAGAA 343909 Query 262093 GATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAA 262152 |||||| |||||| ||| |||||| | |||||| || | |||| |||| ||||||| Sbjct 343908 ACTCTGGTATGCCATTCTCGAGGCCCAGACCGAGACTGGTAACCCCTTCATGCTCTACAA 343849 Query 262153 GGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCA--CGACAGAGGCCAAC 262210 ||| ||| |||| || || |||||| |||||||||| || | || ||| | ||| Sbjct 343848 GGATGCCTGCAACAGGAAGAGTAACCAGAAGAACCTGGGTACTATTCG-CAG-CTCTAAC 343791 Query 262211 CTGTGCACCGAGATC 262225 |||||||| |||||| Sbjct 343790 CTGTGCACTGAGATC 343776 >seq43 Length=2128823 Score = 89.7 bits (98), Expect = 7e-12 Identities = 118/160 (74%), Gaps = 3/160 (2%) Strand=Plus/Minus Query 724984 ACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGC-GCGC 725042 ||||||| ||| | ||||| |||| || ||| || |||||| ||||| ||| Sbjct 82479 ACTCGTTCGTCCA-GACATTTTCGAGCGTGTCGCTACGGAGGCCTCCAAGCTGGCTGCG- 82422 Query 725043 TCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATG 725102 | ||||||| || ||| | | || |||||||||||| | || ||||||||| | Sbjct 82421 TACAACAAGAAGTCTACCATCTCCTCCCGGGAGATCCAGACCTCGGTCCGCCTGATCCTC 82362 Query 725103 CGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 | ||| || ||||||| |||||||||||| |||||||||| Sbjct 82361 CCCGGTGAGCTGGCCAAGCACGCCGTCTCTGAGGGCACCA 82322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177797407387166