Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq39 91.5 1e-13 seq50 84.2 2e-11 >seq39 Length=1271420 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | || | ||||| ||||| || || Sbjct 1240545 GTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATCTTCAAGCTGCTTGCCT 1240486 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||||||||| || || | ||||| ||||| ||||||| ||| Sbjct 1240485 GCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCCTCCTTATCTTGGATCTTGGACTTC 1240426 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | |||||| | | || || || || || |||| |||||| || || || Sbjct 1240425 ACATTATCGATAGTGTCGGATGACTCGACCTCAAGTGTAATAGTTTTGCCAGTGAGCGTC 1240366 Query 27231 TTCACAAAGATTTGCATA 27248 || || || || |||||| Sbjct 1240365 TTGACGAAAATCTGCATA 1240348 >seq50 Length=3651712 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 27060 TTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATG 27119 || || || ||||||||||||| | |||| | || |||||||| || |||||| | || Sbjct 1677409 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 1677468 Query 27120 AGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCT 27179 || |||||||| || || || | ||||| || || ||||||| | || | | | || Sbjct 1677469 AGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 1677528 Query 27180 ACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAA 27238 | ||||| | | || || || || || || | || |||||||| || || || || Sbjct 1677529 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 1677587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933659419016