Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq45 250 3e-61 seq44 89.7 6e-13 seq49 84.2 3e-11 >seq45 Length=2363327 Score = 250 bits (276), Expect = 3e-61 Identities = 579/866 (67%), Gaps = 19/866 (2%) Strand=Plus/Plus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || ||||||| || |||| |||||||||||| |||||| | ||||||| | Sbjct 343717 GGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATG 343776 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 || || || || | ||| || || ||| || |||| ||||| |||||||||||| || Sbjct 343777 ATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTG 343836 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| |||||||||||||||||| |||| | || ||||| ||||| | | |||||| Sbjct 343837 TTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATG 343896 Query 111410 GCCTTCCA-AACATCGGCGGCTGGTACAATGGCGTT--GGCC-CGTCCCTCCGCCTCGTA 111465 || | ||| | || | | || | |||| || |||| || ||||| |||||| Sbjct 343897 GCATACCAGAGTTTCTGAGCCTTG----ATGGTCTTGCGGCCACGGCCCTCTTGCTCGTA 343952 Query 111466 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTC 111525 ||| | ||| ||||| || |||||||| || | || | || || || |||| || Sbjct 343953 CTTGGCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTT 344012 Query 111526 TGGACAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAAT 111585 || ||||| || | ||| | ||| ||||||| |||||||| || ||||| || | Sbjct 344013 GGGGCAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGT 344072 Query 111586 CCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAA 111645 |||||| | | || || || | ||| |||| || | ||| ||||| || | Sbjct 344073 CCACAGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAG 344132 Query 111646 CTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGA------TAGA 111699 || ||||| || | || ||| |||||||| ||||| || |||| || | || Sbjct 344133 ATCGAGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACCAGG 344192 Query 111700 TCCCTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCAT 111759 | ||| | ||| | || | |||||||| || ||| |||||| || || ||||| Sbjct 344193 GCGCTTGTTA---CCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCAT 344249 Query 111760 TGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC 111819 |||| |||||| | || || || || || | ||| ||| | || | | Sbjct 344250 AGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAAT 344309 Query 111820 ATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAG 111879 |||| | || || ||||| || || ||| ||||| ||||| | | || Sbjct 344310 GCGGTGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAG 344369 Query 111880 AGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACAT 111939 ||| |||||||||| | ||| ||| | | || | | ||||||||| | | Sbjct 344370 AGTATCATAGATACCCTCGATGCTGTCAGCGCTCATGTCAACCAGGAAGCAAGATGCAAG 344429 Query 111940 CTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-T 111998 ||| ||| || ||| | |||||||| || || || | ||||| |||| ||| | | Sbjct 344430 CTGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAA-GTACTTCT 344488 Query 111999 GGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTG 112058 |||||||| || ||||||||| | | | |||||||| || ||||||||||||| | Sbjct 344489 GGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAG 344548 Query 112059 CGACCCGCATGAACATGTACTGTGGG 112084 | || ||||| | || || ||| ||| Sbjct 344549 CAACACGCATCAGCAAGTGCTGGGGG 344574 >seq44 Length=2810928 Score = 89.7 bits (98), Expect = 6e-13 Identities = 209/311 (67%), Gaps = 6/311 (2%) Strand=Plus/Minus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 || ||||||||||||||||||| || || || || | ||||| | | |||||| Sbjct 1775653 GCGTCAATCTCATCAATGAAGATGATGCAGGGGGTGTTCTTTCGGGCATTGGCGAAGAGA 1775594 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAG-CA 11748 ||||| || | || ||| ||||| |||||||| || || || | | || | || Sbjct 1775593 TCGCGGACACGAGAGGGACCGACACCGACAAACATTTCAACGAATTCGGAACCACTGACA 1775534 Query 11749 CTGGATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 ||| | ||| || || |||||||| || |||| || || | ||||| || || Sbjct 1775533 CTGTA-GAAAGGCACGCCAGATTCACCAGCAGTGGCCTTAGCAAGCAATGTCTTACCAGT 1775475 Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC--ACTTCCAAAATAT 11866 ||| || ||| | ||| | ||| || ||||| ||||| ||||| ||||| | | Sbjct 1775474 ACCGGGAGGACCTGAGAGGATGGCACCACGGGGAATCTTTGCACCCAACTTCTCGA--AC 1775417 Query 11867 CTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCGTCAATC 11926 | ||||||||||| ||| || || | || | ||| | |||||| |||| || Sbjct 1775416 CGCTCGGGTTGCTGGAGGAAGCTAACGAATTCCATGATCTCAACCTTGGCCTCGTCCATG 1775357 Query 11927 CCCTCAACATC 11937 ||| |||| || Sbjct 1775356 CCCGCAACGTC 1775346 >seq49 Length=5411691 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729 |||||| ||||| || || || || || || || ||||| ||||| ||||| || || Sbjct 2791051 GTGGAGCCCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCC 2790992 Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789 |||||||||| ||| | || | |||||| || ||||||||||||||||| ||| Sbjct 2790991 ACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 2790932 Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 || || |||| || || ||||||| Sbjct 2790931 GGCGAAGGCAACCAGACGCGAAGCGAAGG 2790903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030877392800