Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq45 223 4e-53 seq49 125 9e-24 >seq45 Length=2363327 Score = 223 bits (246), Expect = 4e-53 Identities = 570/862 (66%), Gaps = 13/862 (2%) Strand=Plus/Plus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || ||||||| || ||||| || || |||| |||||| || ||||||| || Sbjct 343717 GGGAGGGCGAGGGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCAATG 343776 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||||||| ||| || || ||| || |||| |||||| || || ||| || Sbjct 343777 ATCTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCCTG 343836 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || ||||||||||| |||||| | || | || ||||| || |||| || |||||| Sbjct 343837 TTGCAGGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCCTCGAGAATG 343896 Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTT 118943 || | ||||| | ||| | || | | | || ||||||| ||||||||| Sbjct 343897 GCATACCAGAGTTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCTTGCTCGTACTTG 343956 Query 118944 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 119003 | ||| ||||| || ||||| || || | | || | || || || |||| | ||| Sbjct 343957 GCGTAAAGGGCATCGAACTCCTCGCCGTAGACATCAGCCAGGCCGGGAGCCTCGTTGGGG 344016 Query 119004 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 119063 |||||||| | ||| | ||| ||||||| |||||||| |||||||| ||| |||| Sbjct 344017 CAGAAGAGTGTCCAGTCACCGTTGGCCTCAACGCGCTTCATAAAGAGGTCGGGGGTCCAC 344076 Query 119064 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 119123 || || |||| || || || ||| | || || | || || || |||| || Sbjct 344077 AGAGCGTAGAAAAGGTCACGGGCACGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCG 344136 Query 119124 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA 119183 | || || | || ||| ||||||||||| |||||||| | || | | || | | Sbjct 344137 AGGAATTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATAGCAAAGGCACC---AGGG 344193 Query 119184 CG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGA 119237 || |||| |||||| ||||| | || ||| |||||| ||||| ||||| ||| Sbjct 344194 CGCTTGTTACCACCCTGGTCGACATAGCGTGCGGTGTTGTTAAACACACGCAGCATAGGA 344253 Query 119238 ATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCG 119297 | ||||| | ||| ||| || || || | ||| ||| | || | | | Sbjct 344254 ACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCGCGAATGCGG 344313 Query 119298 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTG 119357 |||| | || ||| ||||| || || ||| ||||| || || | ||||| | Sbjct 344314 TGGACATTCAGACCGATACCACCGGCGGTCTTGGAGATCATGGCACAAGTCTTGAGAGTA 344373 Query 119358 CCGTAGATCCCATCGATCGAGTCA-CCCTTATTTGCGATGAGGAAGCAGCTCGACATTTG 119416 | ||||| || ||||| |||| | || || | | | |||||||| | | || Sbjct 344374 TCATAGATACCCTCGATGCTGTCAGCGCTCATGT-CAACCAGGAAGCAAGATGCAAGCTG 344432 Query 119417 AGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGG 119475 || ||| ||| | || ||||| ||||| || | |||||| |||| ||| | |||| Sbjct 344433 GGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAAGCGTGGGTGAA-GTACTTCTGGG 344491 Query 119476 ACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGA 119535 ||||| || ||| ||||| | | | |||||| || ||||| || |||| | | Sbjct 344492 ACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGGATGCCGACAGCAA 344551 Query 119536 CCCGCATAAACATGTATTGGGG 119557 | ||||| | || || ||||| Sbjct 344552 CACGCATCAGCAAGTGCTGGGG 344573 >seq49 Length=5411691 Score = 125 bits (138), Expect = 9e-24 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 |||||| ||||||||||| ||||| || || || ||||| ||||| ||||| || || Sbjct 2791051 GTGGAGCCCCTCGTCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCC 2790992 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||||| |||||| || | | |||||||||||||||||||| ||||| ||| Sbjct 2790991 ACGCTTCTTCAGCCAGAAGATGGAAGCGAATGAGCCAGAGAAGAAGATACCCTCGACAGC 2790932 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 ||||| |||| |||||| ||| |||| Sbjct 2790931 GGCGAAGGCAACCAGACGCGAAGCGAAGG 2790903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434094547080