Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq39 114 3e-20 >seq39 Length=1271420 Score = 114 bits (126), Expect = 3e-20 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 ||||||||| || || || || || || ||||||||||| |||| | || | ||||| Sbjct 1240561 GAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGTGTACGGCCATC 1240502 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || || |||||||| || | ||| || || | | || || ||||| || Sbjct 1240501 TTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGAATGCCCTCCTTATC 1240442 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || || ||| | || | |||| || ||| || ||||| |||||||| Sbjct 1240441 TTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACCTCAAGTGTAATAGT 1240382 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| ||||| ||||| ||||| | |||||| Sbjct 1240381 TTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 1240349 Score = 93.3 bits (102), Expect = 1e-13 Identities = 140/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| |||||||| ||||||||||| |||| | ||| | || || || | Sbjct 1240327 CAAG-TGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCGTCCTCCA 1240269 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || |||||||| ||||| | ||||||||| | | || || ||||| || |||| Sbjct 1240268 ACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTGTCCTGAA 1240209 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | | |||| || ||| || || ||||| ||||| || | Sbjct 1240208 TCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAACCTCGAGAGTGATAGTCTTTC 1240149 Query 152077 CCGTGAGAGTCTTCACGA 152094 | || || ||||| |||| Sbjct 1240148 CGGTCAGGGTCTTGACGA 1240131 Score = 89.7 bits (98), Expect = 1e-12 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972 ||| || ||||||||||| || | | ||| | || || || || || || ||||| Sbjct 1240768 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAA 1240709 Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032 |||||| | ||||||||| | | || || ||||| || || || || || || | Sbjct 1240708 GATAAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCCTGGATCTTGCTCTTAACGTT 1240649 Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || | ||||||| ||||| || || || || ||||| || || || |||||||| || Sbjct 1240648 GTCGATAGTGTCTGAGCTCTCGACCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGAC 1240589 Query 152093 GAAGACCTGCAT 152104 |||| |||||| Sbjct 1240588 AAAGATCTGCAT 1240577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153818685983953