Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04-
06] 143 sequences; 31,410,885 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq39 174 3e-38
seq50 143 6e-29
seq47 114 3e-20
seq49 86.0 1e-11
>seq39
Length=1271420
Score = 174 bits (192), Expect = 3e-38
Identities = 179/229 (78%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| |||||||| || | ||||| || | ||||| || || |||||||||||||| | |
Sbjct 1240803 CCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 1240744
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || || ||||| || || || || || ||||| | ||| || |||||| |||
Sbjct 1240743 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGGA 1240684
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTA-CGGTATCGATAGTGTCCGAAGCT-TCGA 283050
|||||||||||||| |||||||| ||| ||| || | ||||||||||| | |||| ||||
Sbjct 1240683 ATACCCTCCTTGTCCTGGATCTT-GCTCTTAACGTTGTCGATAGTGTCTG-AGCTCTCGA 1240626
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
| || || ||||| ||||| || |||| |||||| || || ||||||||
Sbjct 1240625 CCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 1240577
Score = 150 bits (166), Expect = 4e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || || || || | ||| ||| || |||||||||||||| |
Sbjct 1240576 ACCACCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGA 1240517
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || |||||||| || || || || || || ||||| | ||| ||||| || ||
Sbjct 1240516 GAGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGG 1240457
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||| ||||||||||| | || || ||||||||||||| || | |||||
Sbjct 1240456 AATGCCCTCCTTATCTTGGATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGAC 1240397
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || || || || || || || | ||||| ||||| ||||||||
Sbjct 1240396 CTCAAGTGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 1240349
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || || || |||| |||| ||| ||||| |||||||||||||| |
Sbjct 1240348 ACCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGA 1240289
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || || ||||| | || || ||||| || || | ||| || ||||| ||
Sbjct 1240288 CAGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGG 1240229
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| ||||||||||| || ||||| | || ||| | ||||| ||||| || | || ||
Sbjct 1240228 AATGCCCTCCTTGTCCTGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAAC 1240169
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
||||||||||| ||||| || |||| ||||| ||||
Sbjct 1240168 CTCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGACGA 1240131
Score = 127 bits (140), Expect = 4e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| |||||||| |||| || | || || || |||||||||||||| |
Sbjct 1240064 CCGCCACGGAGGCGAAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 1240005
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || || ||||| || || || ||||| ||||||||||| ||||||||| ||
Sbjct 1240004 AGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGGG 1239945
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|||||||||||||| |||||||| | || ||| | ||||| || || | || ||
Sbjct 1239944 ATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTATCGCTGGACTCAACC 1239885
Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075
|| || ||||| ||||| || ||
Sbjct 1239884 TCAAGGGTGATGGTCTTGCCAGT 1239862
>seq50
Length=3651712
Score = 143 bits (158), Expect = 6e-29
Identities = 139/179 (78%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| || |||||||||||||| || || || ||||| ||||||
Sbjct 1677409 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATC 1677468
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| || ||||||||| || || ||||||||||| |||||||| | || ||| | |||
Sbjct 1677469 AGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 1677528
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| | ||||| ||||| || || ||||||||||||| ||||| |||||
Sbjct 1677529 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 1677587
>seq47
Length=3056837
Score = 114 bits (126), Expect = 3e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||||||||| || || || || | || || || |||||||||||||| |
Sbjct 1459078 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 1459019
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || || || ||||||| || |||||||| ||
Sbjct 1459018 AAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCGGGGGG 1458959
Query 282992 AATACCCTCCTTGTCT 283007
||||||||||||||||
Sbjct 1458958 AATACCCTCCTTGTCT 1458943
>seq49
Length=5411691
Score = 86.0 bits (94), Expect = 1e-11
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250
|||||||| | |||||| |||| ||| ||| | |||||||| | | || |||
Sbjct 2791146 AGGAGTTCTTGACTGACGCTCTTCCCTGCGCTCTGCTTGGCATGAACTCCAAGCTGATGT 2791205
Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310
| || || || || ||||| ||||| || | | ||||| || || || |||| |
Sbjct 2791206 GCCAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACT 2791265
Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370
| ||||| || ||||||| || |||||| ||| || || || || || ||||
Sbjct 2791266 ACAACTCTGCCAATCCCTTCGACTTCATGGAGTCCATCTCTCTGGCCGGCAAGACCAACT 2791325
Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||||| ||||||||| | || || || | | | |||||
Sbjct 2791326 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 2791365
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046737282177522
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |