Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20chrysogenum_20[genbank_20GCA_5F002080375.1_202017-04- 06] 143 sequences; 31,410,885 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq39 156 4e-33 seq50 147 2e-30 seq47 105 6e-18 >seq39 Length=1271420 Score = 156 bits (172), Expect = 4e-33 Identities = 176/232 (76%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| |||||||| ||||| |||||||||||||| ||||| ||||| || Sbjct 1240804 GCCGCCACGCAGACGCAACACCAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 1240745 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || |||| || |||||||| || ||||| || || ||||| ||||| | ||| Sbjct 1240744 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGGGG 1240685 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTC---GCTCGACT 41810 || | |||||||||| ||| || ||| |||| | | | |||||| ||| || Sbjct 1240684 AATACCCTCCTTGTCCTGGATCTTGCTCTT-AACGTTGTCGATAGTGTCTGAGCT---CT 1240629 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | ||||| | ||| || || || || ||||| ||||| || || |||||||| Sbjct 1240628 CGACCTCTAGCGTGATAGTCTTTCCGGTCAGAGTCTTGACAAAGATCTGCAT 1240577 Score = 132 bits (146), Expect = 4e-26 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || ||| |||||||| ||||| ||||||||| Sbjct 1240575 CCACCACGAAGACGGAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 1240516 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || ||||||||||| ||||| || || |||||||| || | ||| Sbjct 1240515 AGTGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGTTGATCGGGAGGA 1240456 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCCA 41813 | || |||||| || ||| || ||||| | | || | ||||||| ||||| | Sbjct 1240455 ATGCCCTCCTTATCTTGGATCTTGGACTTCACATTATCG--ATAGTGTCGGATGACTCGA 1240398 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || || ||||| || || |||||||| |||||||||||||| Sbjct 1240397 CCTCAAGTGTAATAGTTTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 1240349 Score = 125 bits (138), Expect = 7e-24 Identities = 160/218 (73%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | |||| || || ||| ||| ||||| ||||| |||||||| Sbjct 1240347 CCACCACGTAGACGGAGAACCAAGTGTAGAGTGGACTCTTTCTGGATGTTGTAGTCGGAC 1240288 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || | ||||||||||||||| || || ||||| ||||| | |||| Sbjct 1240287 AGAGTACGACCGTCCTCCAACTGCTTGCCGGCGAAAATAAGACGCTGCTGGTCGGGGGGA 1240228 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || | | |||| | | | ||||| ||||| || Sbjct 1240227 ATGCCCTCCTTGTCC-TGAATCTTGGACTTAACGTTGTCGATGGTGTCAGATGACTCAAC 1240169 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||| | || || || || || ||||| ||||| |||| Sbjct 1240168 CTCGAGAGTGATAGTCTTTCCGGTCAGGGTCTTGACGA 1240131 Score = 105 bits (116), Expect = 6e-18 Identities = 148/205 (72%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || || || | |||| || || || ||||||||| ||||| |||||||| Sbjct 1240065 GCCGCCACGGAGGCGAAGAACCAAGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 1240006 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || |||| || ||||||||||||||||| |||| ||||||||||| | || Sbjct 1240005 CAGAGTACGACCGTCCTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCAGGAGG 1239946 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || ||| ||| | | | || ||||| ||||| | Sbjct 1239945 GATACCCTCCTTGTCCTGGATCTTCGACTT-GACGTTGTCGATGGTATCGCTGGACTCAA 1239887 Query 41814 CCTCCACCGTTATCGTTTTACCCGT 41838 |||| | || || || || || || Sbjct 1239886 CCTCAAGGGTGATGGTCTTGCCAGT 1239862 >seq50 Length=3651712 Score = 147 bits (162), Expect = 2e-30 Identities = 144/183 (79%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || |||||||||||||||||||| | Sbjct 1677407 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 1677466 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||||||||||||||| | ||| | || |||||||||| ||| || ||| ||| | Sbjct 1677467 TCAGGCGCTGTTGGTCAGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTG 1677525 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 1677526 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 1677585 Query 41852 AAA 41854 ||| Sbjct 1677586 AAA 1677588 >seq47 Length=3056837 Score = 105 bits (116), Expect = 6e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | || || || || || ||||||||| ||||| ||||| Sbjct 1459081 ACCACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTC 1459022 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| | || ||||||||||| || ||||| ||||||||||||||||| | Sbjct 1459021 CGAAAGAGTGCGGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGGCGCTGTTGGTCGGG 1458962 Query 41752 GGGAACGCTCTCCTTGTC 41769 ||||| | ||||||||| Sbjct 1458961 GGGAATACCCTCCTTGTC 1458944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303173631600