Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19] 976 sequences; 31,529,786 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq381 143 6e-29 seq478 114 3e-20 >seq381 Length=63781 Score = 143 bits (158), Expect = 6e-29 Identities = 564/872 (65%), Gaps = 25/872 (3%) Strand=Plus/Plus Query 229780 ATGTGGGATATGTACAAGAAGGCGGTGGCAACTTTCTGGACCACTGAGGAAGTTCCTCTG 229839 || ||| | |||||||||||||| | ||| ||||||||||| | ||||| || |||| Sbjct 4288 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCTTTCTGGACCGCCGAGGAGATTGATCTG 4347 Query 229840 AACGCAGACGTCGTCGACTGGCGTGAGAAACTCAATGACGACGAACGTCATTTCATCAAA 229899 | || | |||||||| | || || || || || ||| | ||| || Sbjct 4348 TCCAAGGATCTTCACGACTGGCACAACCGCCTGAACGATGATGAGCGTTACTTCGTCTCT 4407 Query 229900 CACATCCTAGGTTTTTTCGCAGGCTCCGATGGTATTGTGATGGAAAATCT-GCAGACCAA 229958 ||| | || | ||| ||||| | ||| || || ||||| | || || || | || | Sbjct 4408 CACGTTCTTGCTTTCTTCGCCGCCTCTGACGGCATTGTCAATGAGAACCTTGTTGAGCGT 4467 Query 229959 CTTTAGTGTGGAAGTAACGGTTCCAGAGGCACGGCAATTTTATGCTTACCAAACATTCAA 230018 || || | || || ||| | ||||| || || |||| || ||| | | | Sbjct 4468 -TTCAGCGCTGAGGTCCAGGTCACTGAGGCTCGCTGCTTCTATGGTTTCCAGATTATGAT 4526 Query 230019 CGAATCTATCCATTCTGAACAATATGCTCTGCTTATCGACGCGCTTATTTCCGACGAGC- 230077 || |||||| || || || | || |||||||| | || | | |||| Sbjct 4527 GGAGAATATCCACTCCGAGACCTACTCCCTTCTTATCGATACCTACAT---CAAGGAGCC 4583 Query 230078 -AAG-AACGGAACGAGCTTTTTGATGCCATTGAAAACAT-CCCGGCGGTTCATAACAAGG 230134 ||| |||| | | | || || ||||||||||||| ||| ||| || | | ||||| Sbjct 4584 CAAGCAACGCACCTACCTCTTCGATGCCATTGAAACCATTCCCTGCA-TCAAGCGCAAGG 4642 Query 230135 CAAAGTGGGC--TCAGAAATGGCT---AGAACCTGGTAAATCGTTTGCCGAGCGTCTCGT 230189 | | ||||| || | ||| | ||| | || | | ||||| |||||||| Sbjct 4643 CCGATTGGGCCATCCGC--TGGATCCAAGACCGTGATTCTACCTTTGCTTCCCGTCTCGT 4700 Query 230190 CGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCT 230249 |||| | || || ||||| | || || || |||| | | ||||| ||||| Sbjct 4701 TGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCTTTCGCCTCTATCTTCTGGCT 4760 Query 230250 GCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGA 230309 ||| ||| | ||||| || || | ||||||||| ||||| || || || Sbjct 4761 CAAGAAGCGTGGTCTCATGCCCGGTCTGACCTTCTCTAACGAGCTCATCTCCCGTGATGA 4820 Query 230310 GGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTCCAGAACAAGCTACCATT 230369 |||||| || | |||| | ||| ||| || | || |||||| | || Sbjct 4821 GGGTCTGCACACTGACTTCGCCTGCCTTCTGTTCTCCCACCT---GAACAACCGCCCCAG 4877 Query 230370 CGAGACGGT---CAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTG 230426 | || ||| | | | |||||| || || |||| || || | |||||| | Sbjct 4878 CAAGCAGGTTGTCCAGGACATCATTGTTGAGGCTGTTGGAATTGAGCAAGAGTTCCTGAC 4937 Query 230427 TGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCG 230485 ||||||| |||| || ||| || | ||||||||||| | || ||| | |||||||| | Sbjct 4938 TGACGCTCTTCCTTG-CGCTCTGCTCGGCATGAACGCCAAGCTGATGTGCCAGTACATTG 4996 Query 230486 AATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGA 230545 | ||||| || ||||| | | || || || ||| || |||| ||||||||| | Sbjct 4997 AGTTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGTAACCAGAAGTACTACAACTCTGCCA 5056 Query 230546 ACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGC 230605 ||||||| | || |||||| ||| || || || ||||||||||||||||| |||| Sbjct 5057 ACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACTTCTTCGAGAAGC 5116 Query 230606 GTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 ||||| ||||||| |||| | | ||||| ||| Sbjct 5117 GTGTCGGTGACTACCAGAAGGCCGGTGTTATG 5148 >seq478 Length=101117 Score = 114 bits (126), Expect = 3e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 319470 GGTGCAAACAGCGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTT 319529 |||||| || |||| ||||| || |||||||| ||||| |||| || | | ||| | Sbjct 46078 GGTGCAGACCTCGTCAAGGAAGCCAGAGTCGTGAGACACGATCAAGCTAGTGATGTCGGT 46137 Query 319530 AAGGTTGATCAGGTATTCAATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGG 319589 | || | ||||| || || |||| | ||||| | ||| |||||||| || || Sbjct 46138 GTGCTTCTTGAGGTACTCCTGCAGCCACTTGACGTTCGCAACATCCAGATGGTTAGTAGG 46197 Query 319590 CTCGTCAAGAAGCAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCAT 319649 |||||||||||||| | | || ||||| ||||| ||||| || |||||||| ||||| Sbjct 46198 TTCGTCAAGAAGCAGAACATCGGCCTTCAGAAGCATGGCACGAGCCAGAGCGAGCTTCAT 46257 Query 319650 TTTCCACCCTCCGGAAAG 319667 ||||| || || || || Sbjct 46258 CTTCCAACCACCAGACAG 46275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057810771910880