Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq381 105 7e-18
>seq381
Length=63781
Score = 105 bits (116), Expect = 7e-18
Identities = 542/851 (64%), Gaps = 15/851 (2%)
Strand=Plus/Minus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| || | || || || ||||| ||||| || ||||| | || || || ||||
Sbjct 5132 TGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCC 5073
Query 16736 ATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAA 16794
||||| || || || || | || | | || || | |||| || || | | |
Sbjct 5072 ATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTACCG-AGAGCGACCAGGAG 5014
Query 16795 TCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA-C 16853
| || || || || || || || |||||||| | | | |||||| || | ||| |
Sbjct 5013 ACGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGCAGAGC 4954
Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA- 16912
| | |||||||| || |||| || |||||| || |||| || || ||| ||
Sbjct 4953 GCAA-GGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAATGATGT 4895
Query 16913 -CTAG-CAACTCG-TTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCG 16969
|| | |||| | || || || |||| |||| | | || |||| || || |||
Sbjct 4894 CCTGGACAACCTGCTTGCTGGGGCGGT---TGTTCAGG-TGGGAGAACAGAAGGCAGGCG 4839
Query 16970 AAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGC 17029
|| || || | ||||| || | | ||| || |||||||| || |||| ||||||
Sbjct 4838 AAGTCAGTGTGCAGACCCTCATCACGGGAGATGAGCTCGTTAGAGAAGGTCAGACCGGGC 4779
Query 17030 ATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCC 17089
|| || || ||||| | ||| || || | |||||| || ||||| ||||| ||||||
Sbjct 4778 ATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCC 4719
Query 17090 TCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCAT 17149
||||||| || || || | | || || | || | || || | |||||
Sbjct 4718 TCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAGGTAGAATCACGGTCTTGGATCCAG 4659
Query 17150 TTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAAT 17209
|||| ||||| || |||| ||||| || ||||| ||||| | || |
Sbjct 4658 CGGATGGCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGTTTCAATGGCATCGAAGAGG 4599
Query 17210 TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAG 17269
| || || | || | || || |||||||| || ||| ||| | ||||||
Sbjct 4598 TAGGTGCGTTGCTTGGGCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGTCTCGGAG 4539
Query 17270 TGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACT 17329
|| || |||||||| ||||| || || || ||||| || || || | | || ||
Sbjct 4538 TGGATATTCTCCATCATAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGACCTGGACC 4479
Query 17330 TCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAAC 17389
|| || ||| || || | || || || || || |||||||| |||||||| ||
Sbjct 4478 TCAGCGCTGAAACGCTCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGCGAAGAAA 4419
Query 17390 GCCAATATATGCTTAATGAAATATTTTTCGTC--CGGT-GTAAGAACGCGCCAGTCCTTT 17446
|| | | || | ||| || || || || | | | ||||||| |
Sbjct 4418 GCAAGAACGTGAGAGACGAAGTAACGCTCATCATCGTTCAGGCGGTTGTGCCAGTCGTGA 4359
Query 17447 AAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATAC 17506
| ||| ||||| | ||| | || |||| |||||| ||| |||| | ||||| || |||
Sbjct 4358 AGATCCTTGGACAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTAC 4299
Query 17507 ATATTCCAAAT 17517
|| | ||| ||
Sbjct 4298 ATTTGCCAGAT 4288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517539285943680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |