Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19] 976 sequences; 31,529,786 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq511 116 2e-21 >seq511 Length=52245 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| || ||| || ||||| |||||||||||||| || ||| | || Sbjct 18808 AGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCT 18867 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||||| |||||||| || || || ||||| ||| | | |||||| || Sbjct 18868 TCAAGTTGCTTGCCGGCGAAAATTAGACGTTGTTGGTCAGGGGGGATACCCTCCTTATCT 18927 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | |||| || | ||||| || |||| ||||| || Sbjct 18928 TGGATCTTGCTCTTCACATTATCAATCGTGTCTGATGATTCAACCTCCAAAGTGATAGTC 18987 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||||||||| || |||||||||||||| Sbjct 18988 TTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 19019 Score = 113 bits (124), Expect = 3e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| |||||||| | || ||| ||||| ||||| |||||||| Sbjct 19322 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAA 19381 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || ||||||||||| || |||||||| || ||||| ||||| || Sbjct 19382 AGGGTGCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGGG 19441 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||||| ||||| ||| | || | | || | |||| | || ||||| Sbjct 19442 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGCTGGACTCGACC 19501 Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| |||||||||| Sbjct 19502 TCAAGAGTGATGGTCTTGCCGGTGA 19526 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||||||| | ||| || ||||| |||||||| || || || ||| | || Sbjct 18580 AGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCT 18639 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| |||||| || || || || || ||||| |||||| ||| | | ||||||||| Sbjct 18640 TCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCC 18699 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | |||| || || || |||| |||||||| Sbjct 18700 TGGATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAATGTGATGGTC 18759 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| | ||| || || ||||||||||| Sbjct 18760 TTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 18791 Score = 87.8 bits (96), Expect = 1e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||| |||| ||| | ||| ||||||||| || |||||||||||| Sbjct 19021 CCACCACGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGAC 19080 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| | || || | ||| || || ||||| ||||| ||||| ||||| || Sbjct 19081 AGGGTACGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGG 19140 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || |||||| || ||||| ||| | | | || | ||| | || || || Sbjct 19141 ATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAACC 19200 Query 34343 TCCACCGTGATGGTTTTGCCGGT 34365 || | ||||| || |||||||| Sbjct 19201 TCAAGGGTGATAGTCTTGCCGGT 19223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323068157058560