Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq511 116 2e-21
>seq511
Length=52245
Score = 116 bits (128), Expect = 2e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| |||| ||| || ||| || ||||| |||||||||||||| || ||| | ||
Sbjct 18808 AGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCT 18867
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | |||||||| |||||||| || || || ||||| ||| | | |||||| ||
Sbjct 18868 TCAAGTTGCTTGCCGGCGAAAATTAGACGTTGTTGGTCAGGGGGGATACCCTCCTTATCT 18927
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | || | |||| || | ||||| || |||| ||||| ||
Sbjct 18928 TGGATCTTGCTCTTCACATTATCAATCGTGTCTGATGATTCAACCTCCAAAGTGATAGTC 18987
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||||||||| || ||||||||||||||
Sbjct 18988 TTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 19019
Score = 113 bits (124), Expect = 3e-20
Identities = 148/205 (72%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| |||||||| | || ||| ||||| ||||| ||||||||
Sbjct 19322 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAA 19381
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| ||| | || ||||||||||| || |||||||| || ||||| ||||| ||
Sbjct 19382 AGGGTGCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGGG 19441
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||||| ||||| ||| | || | | || | |||| | || |||||
Sbjct 19442 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGCTGGACTCGACC 19501
Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367
|| | |||||||| ||||||||||
Sbjct 19502 TCAAGAGTGATGGTCTTGCCGGTGA 19526
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
||||||||||| | ||| || ||||| |||||||| || || || ||| | ||
Sbjct 18580 AGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCT 18639
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|||| |||||| || || || || || ||||| |||||| ||| | | |||||||||
Sbjct 18640 TCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCC 18699
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | |||| || || || |||| ||||||||
Sbjct 18700 TGGATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAATGTGATGGTC 18759
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||||||| | ||| || || |||||||||||
Sbjct 18760 TTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 18791
Score = 87.8 bits (96), Expect = 1e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| || ||||| | ||| |||| ||| | ||| ||||||||| || ||||||||||||
Sbjct 19021 CCACCACGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGAC 19080
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| |||| | || || | ||| || || ||||| ||||| ||||| ||||| ||
Sbjct 19081 AGGGTACGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGG 19140
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || |||||| || ||||| ||| | | | || | ||| | || || ||
Sbjct 19141 ATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAACC 19200
Query 34343 TCCACCGTGATGGTTTTGCCGGT 34365
|| | ||||| || ||||||||
Sbjct 19201 TCAAGGGTGATAGTCTTGCCGGT 19223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323068157058560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |