Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq302 96.9 3e-15
seq511 86.0 5e-12
>seq302
Length=110528
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206
||||||| |||||||||||| |||| ||| | || || || || || || ||||| |
Sbjct 87375 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 87434
Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266
||| ||||||||||| || || | ||||||||||||| || || ||| ||
Sbjct 87435 TCAGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 87494
Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326
| | | |||| | ||| || || | |||||| ||||| |||||||| ||||| || |
Sbjct 87495 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 87554
Query 45327 A 45327
|
Sbjct 87555 A 87555
>seq511
Length=52245
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||||||| || || || ||||| || ||||||||| ||| || | || ||
Sbjct 19039 ACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGACAGGGTACGGCCATCCTCA 19098
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| |||||||| ||||| || | ||||||||||| ||||| | |||||||| ||| |
Sbjct 19099 AGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCCTGA 19158
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||| ||||| | ||| || ||||||
Sbjct 19159 ATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAACCTCAAGGGTGATAGTCTTG 19218
Query 45308 CCCGTCAGAGTCTTCAC 45324
|| |||| ||||| ||
Sbjct 19219 CCGGTCAAGGTCTTGAC 19235
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395070500580496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |