Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19] 976 sequences; 31,529,786 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq139 201 2e-47 seq228 168 1e-37 >seq139 Length=60564 Score = 201 bits (222), Expect = 2e-47 Identities = 207/268 (77%), Gaps = 2/268 (1%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || |||| ||| | | || || ||||| || || ||||||||||| ||||| Sbjct 29091 GCCAAGCGCCACCGCAAGATTT-TGCGTGACAACATTCAGGGTATCACCAAGCCTGCTAT 29033 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| |||||||||||||| ||||||||| |||||| || |||| || |||| Sbjct 29032 CCGTCGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTGCCATGATCTACGAGGAGAC 28973 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| |||| | |||| |||||| || | || || | ||| ||| || ||| || || Sbjct 28972 TCGTGGTGTTCTCAAGACCTTCCTTGAGTCTGTCATTCGTGACGCTGTCACCTACACTGA 28913 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| |||||||| ||||| ||| | || |||||||||| | || || || || Sbjct 28912 GCACGCTAAGCGTAAGACCGTCACTTCCCTCGACGTCGTCTATGCCCTCAAGCGCCAGGG 28853 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAA 16699 ||||| | || ||||| || ||||| Sbjct 28852 CCGTACCCTCTACGGTTTCGGTGGTTAA 28825 >seq228 Length=60584 Score = 168 bits (186), Expect = 1e-37 Identities = 189/250 (76%), Gaps = 2/250 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | || || |||||||| || ||||||||||| ||||| Sbjct 19243 GCCAAGCGTCACCGCAAGATTT-TGCGTGACAACATCCAGGGTATCACCAAGCCCGCTAT 19301 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||||||||| ||||| |||||||| ||||||||| |||| | || |||| || |||| Sbjct 19302 CCGTCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAGGAGAC 19361 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||| | |||| ||||||| || || |||| ||| ||| | ||| || || Sbjct 19362 CCGCGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCTGTTACCTACACTGA 19421 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || || ||||| ||||| ||| | || | ||||| || | || || || || Sbjct 19422 GCACGCCAAGCGCAAGACCGTCACTTCCCTCGACGTTGTCTACGCTCTCAAGCGCCAGGG 19481 Query 16672 CCGTAAGATT 16681 ||||||| || Sbjct 19482 CCGTAAGTTT 19491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074307636368