Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq968 140 2e-28
seq745 140 2e-28
seq138 87.8 1e-12
>seq968
Length=2852
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1041 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 982
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 981 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 947
>seq745
Length=8775
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 2339 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2398
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 2399 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2433
>seq138
Length=83961
Score = 87.8 bits (96), Expect = 1e-12
Identities = 175/257 (68%), Gaps = 2/257 (1%)
Strand=Plus/Minus
Query 6232 CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAA-CATGCCTGAAGTC 6290
||||| ||||||||||||| ||||||||||| |||||||||||||| | || || |||
Sbjct 30701 CCAAGATCGAGGGTAAGGGTAACGGTATTAAGACCGTCATTGTCAACCTTGACT-CCGTC 30643
Query 6291 GCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGC 6350
||| | || | || ||| | |||||| | ||||| ||||| | ||| | ||
Sbjct 30642 GCTCGATCCCTGAGCCGTCCTCCTGCCTACCTCATCAAATACTTCGGTTTTGAATTGGGT 30583
Query 6351 GCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCT 6410
||||| | | | | || |||| || | ||| | ||||| | || | ||
Sbjct 30582 GCTCAAGCCAACGCCAAGCCCACCGACGAACGTTGGATCATCAACGGTGCTCACGATGCT 30523
Query 6411 GCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGC 6470
| ||||| ||||| | || || ||||| || |||||| || || || | | |||
Sbjct 30522 CCTAAGCTCCAGGATTACCTGGATGGCTTCATCTCCAAGTTCGTTCTTTGCAAGAAGTGC 30463
Query 6471 GATAACCCGGAGACCGA 6487
| ||||| ||||||||
Sbjct 30462 AAGAACCCTGAGACCGA 30446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334943215803056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |