Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19] 976 sequences; 31,529,786 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq968 140 2e-28 seq745 140 2e-28 seq138 87.8 1e-12 >seq968 Length=2852 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1041 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 982 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 981 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 947 >seq745 Length=8775 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2339 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2398 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2399 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2433 >seq138 Length=83961 Score = 87.8 bits (96), Expect = 1e-12 Identities = 175/257 (68%), Gaps = 2/257 (1%) Strand=Plus/Minus Query 6232 CCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAA-CATGCCTGAAGTC 6290 ||||| ||||||||||||| ||||||||||| |||||||||||||| | || || ||| Sbjct 30701 CCAAGATCGAGGGTAAGGGTAACGGTATTAAGACCGTCATTGTCAACCTTGACT-CCGTC 30643 Query 6291 GCTAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGC 6350 ||| | || | || ||| | |||||| | ||||| ||||| | ||| | || Sbjct 30642 GCTCGATCCCTGAGCCGTCCTCCTGCCTACCTCATCAAATACTTCGGTTTTGAATTGGGT 30583 Query 6351 GCTCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCT 6410 ||||| | | | | || |||| || | ||| | ||||| | || | || Sbjct 30582 GCTCAAGCCAACGCCAAGCCCACCGACGAACGTTGGATCATCAACGGTGCTCACGATGCT 30523 Query 6411 GCCAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGC 6470 | ||||| ||||| | || || ||||| || |||||| || || || | | ||| Sbjct 30522 CCTAAGCTCCAGGATTACCTGGATGGCTTCATCTCCAAGTTCGTTCTTTGCAAGAAGTGC 30463 Query 6471 GATAACCCGGAGACCGA 6487 | ||||| |||||||| Sbjct 30462 AAGAACCCTGAGACCGA 30446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334943215803056