Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq511 131 1e-25
seq302 84.2 2e-11
>seq511
Length=52245
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||||||||||| || |||||||| | ||||||||||| ||
Sbjct 18791 ATGCAGATCTTCGTTAAGACTTTGACCGGCAAGACCATCACATTGGAAGTGGAGTCCTCC 18732
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| ||||| ||||| || ||| ||||| || || ||||| || ||||||
Sbjct 18731 GACACAATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAA 18672
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| |||| ||||| || || || | ||||||| ||||| | ||||||||
Sbjct 18671 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTTTCGGATTACAAC 18612
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| || || || ||||| || || | |||||
Sbjct 18611 ATCCAGAAGGAGTCCACTCTTCACCTGGTGCT 18580
Score = 89.7 bits (98), Expect = 4e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||| | ||||| || | ||||| | || || || || ||
Sbjct 19019 ATGCAGATCTTTGTTAAGACTCTCACCGGCAAGACTATCACTTTGGAGGTTGAATCATCA 18960
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| || ||| || || || || || || |||||||||
Sbjct 18959 GACACGATTGATAATGTGAAGAGCAAGATCCAAGATAAGGAGGGTATCCCCCCTGACCAA 18900
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | ||||| |||||||| ||| | ||||||| ||||| | ||| |||||
Sbjct 18899 CAACGTCTAATTTTCGCCGGCAAGCAACTTGAAGATGGCCGCACCCTTTCCGACTACAAC 18840
Query 25179 ATTCAAAAAGAATCCAC 25195
|| || || || || ||
Sbjct 18839 ATCCAGAAGGAGTCTAC 18823
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/202 (71%), Gaps = 4/202 (2%)
Strand=Plus/Minus
Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070
|| ||||| |||||||| || | ||||| | || || ||||| ||||| |||||
Sbjct 19235 GTCAAGACCTTGACCGGCAAGACTATCACCCTTGAGGTTGAGTCCAGCGACACCATCGA- 19177
Query 25071 TCAC-TGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128
| || | ||| | || | ||| || || || || || || |||||||||||||| | |
Sbjct 19176 TAACGTCAAGTCCAAGATTCAG-GATAAGGAGGGCATCCCTCCTGACCAACAGCGTCTCA 19118
Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188
| || || || ||||| | || |||| || || || ||| |||||||| || ||||
Sbjct 19117 TCTTCGCTGGAAAACAGCTTGAGGATGGCCGTACCCTGTCCGACTACAATATCCAGAAAG 19058
Query 25189 AATCCACGCTACATTTAGTGCT 25210
|||| || || || || || ||
Sbjct 19057 AATCTACCCTTCACTTGGTCCT 19036
Score = 82.4 bits (90), Expect = 7e-11
Identities = 128/181 (71%), Gaps = 4/181 (2%)
Strand=Plus/Minus
Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAGC 25080
||||| || ||||||| | || || ||||| || |||||||| || || |||
Sbjct 19524 ACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGATACTATCGA--CAATGTCAAGT 19467
Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140
|| ||| ||||| ||||| || || |||||||||||||| | ||||| || || |
Sbjct 19466 CCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAACAGCGTCTGATTTTCGCTGGAA 19407
Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200
| || || || |||| ||||| | ||| || || ||||| || |||||||| || |
Sbjct 19406 AGCAGTTGGAGGATGGCCGCACCCTTTCCGACTATAACATTCAGAAGGAATCCACCCTCC 19347
Query 25201 A 25201
|
Sbjct 19346 A 19346
>seq302
Length=110528
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||| |||| ||||| |||| || |||| || |||||| ||||| |||
Sbjct 87555 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGCGACACCATC 87496
Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127
|| | ||| || ||| ||||| || || || || |||||||||||||| |
Sbjct 87495 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGTATCCCCCCTGACCAACAGCGCCTG 87436
Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186
|| || || ||||| || | || |||| |||||| || |||| ||||| || || ||
Sbjct 87435 ATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATCCAGAA 87377
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433322845563440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |