Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq381 134 3e-26
seq187 105 1e-17
seq478 100 6e-16
>seq381
Length=63781
Score = 134 bits (148), Expect = 3e-26
Identities = 537/832 (65%), Gaps = 35/832 (4%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||| ||||| ||||||||||||||||||||| |
Sbjct 5111 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGCA 5052
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| ||||| | ||| | | || || || || | || ||||| || || ||||| |
Sbjct 5051 GAGTTGTAGTACTTCTGGTTACCGAGAGCGACCAGGAGACGGTCAGCGACGAACTCAATG 4992
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | |||||| | | ||||||||| | || | ||||||| || ||| | |
Sbjct 4991 TACTGGCACATCAGCTTGGCGTTCATGCCGAGCAGAGCGCAAGGAAGAGCGTCAGTCAGG 4932
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG-TGCCAGAGA 251798
|| || | || | |||| ||||| | | || ||| ||||| | | | |
Sbjct 4931 AACTCTTGCTCAATTCCAACAGCCTCAACAATGATGTCCTGGACAACCTGCTTGCTGGGG 4872
Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTC 251858
| | ||||| ||| | ||| |||| || | | || | |||||||||||| ||
Sbjct 4871 C-GGTTGTT---CAGGTGGGAGAACAGAAGGCAGGCGAAGTCAGTGTGCAGACCCTCATC 4816
Query 251859 GCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCA 251918
|| ||||| |||||| || | ||| || ||||| | ||||| ||| |||||||
Sbjct 4815 ACGGGAGATGAGCTCGTTAGAGAAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCA 4756
Query 251919 GAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAG 251978
|||||| | | || || |||||||| | | ||||||||| | | ||||| ||
Sbjct 4755 GAAGATAGAGGCGAAAGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAG 4696
Query 251979 GCGCTCAGCAAA---CGACT---TGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTT 252032
|| |||||| || | ||| || | || | || ||||| | |||||
Sbjct 4695 ACGGGAAGCAAAGGTAGAATCACGGTCTTGGATCCAG--CGGATG-GCCCAATCGGCCTT 4639
Query 252033 ---CTT--TCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCA 252087
||| | || ||| || ||||| || ||||| ||||| || | || | ||
Sbjct 4638 GCGCTTGATGCA-----GGGAATGGTTTCAATGGCATCGAAGAGGTAGGTGCGTT--GCT 4586
Query 252088 TCG--TCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGT 252145
| | |||| |||| | ||| | || || ||||| |||| || ||||| ||
Sbjct 4585 TGGGCTCCTTGATGTAGGTATCGATAAGAAGGGAGTAGGTCTCGGAGTGGATATTCTCCA 4526
Query 252146 TGAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTC--CGTGGAAAA 252203
| | |||||| || ||||||| || || || | | ||| || || ||||
Sbjct 4525 TCATAATCTGGAAACCATAGAAGCAGCGAGCCTCAGTGACCTGGACCTCAGCGCTGAAAC 4466
Query 252204 GTTGTTTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGT 252263
| | ||| |||||| | || ||||| || | | || ||||| |||||| |
Sbjct 4465 G--CTCAACAAGGTTCTCATTGACAATGCCGTCAGAGGCGGCGAAGAAAGCAAGAACGTG 4408
Query 252264 CTTGATGAAGTGACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATT 252323
|| ||||| ||||||||| ||||| || || |||||||| || ||||
Sbjct 4407 AGAGACGAAGTAACGCTCATCATCGTTCAGGCGGTTGTGCCAGTCGTGAAGATCCTTGGA 4348
Query 252324 CAGAGGAACTTCTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACATT 252375
|||| || || || | |||||||| | | | | |||||||||||||||
Sbjct 4347 CAGATCAATCTCCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATT 4296
>seq187
Length=12734
Score = 105 bits (116), Expect = 1e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||| |||||||| |||| ||||| || || ||||||| ||||||||||| |||
Sbjct 4446 GGTGTTGATCTGTGCAACTGCACCTTCTCCCTGGCCTATGGTGCCAAGATTCTGCTGAAC 4387
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | ||| |||||||||| | || || ||||| |||||||||| || |
Sbjct 4386 CAGACTCACCTGCGTCTCAAGCGTGGTCAGCGTTACGGTCTGCTCGGTCCCAACGGTTCC 4327
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
||||||| |||||| ||||| || || |||| ||||| || || || || ||
Sbjct 4326 GGTAAGACCACTCTCATGCGTGCTATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 4267
Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGAC 279557
|||||| | ||| || || || |||||||||
Sbjct 4266 GATGAGGTCAAGACCGTCTACGTCGAGCACGAC 4234
>seq478
Length=101117
Score = 100 bits (110), Expect = 6e-16
Identities = 181/264 (69%), Gaps = 3/264 (1%)
Strand=Plus/Minus
Query 279692 GCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCT 279751
||| || || || ||||| |||||||||||||||||||| || || |||| ||||| ||
Sbjct 46288 GCCTGTCGGCTCCCTGTCTGGTGGTTGGAAGATGAAGCTCGCTCTGGCTCGTGCCATGCT 46229
Query 279752 ACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGT 279811
||| |||||||| || || ||||| || || || ||||| |||| | |||||
Sbjct 46228 TCTGAAGGCCGATGTTCTGCTTCTTGACGAACCTACTAACCATCTGGATGTTGCGAACGT 46169
Query 279812 AGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCA 279871
||||| | ||||| | | | | | | || | | || || |||||
Sbjct 46168 CAAGTGGCTGCAGGAGTACCTCAAGAAGCACACCGACATCACTAGCTTGATCGTGTCTCA 46109
Query 279872 CGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAA 279931
||||||||||||||| || | || ||| | | |||| ||||| |||||||| |||
Sbjct 46108 CGACTCTGGCTTCCTTGACGAGGTCTGCACCGACATCTACCACTACGAGCAAAA---GAA 46052
Query 279932 GCTCTCCAAGCACATCGGCAACCT 279955
||| ||| || ||| |||||
Sbjct 46051 GCTGGTCAACTACCCCGGTAACCT 46028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027823946900816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |