Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19] 976 sequences; 31,529,786 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq511 131 4e-25 seq302 116 9e-21 seq381 96.9 8e-15 >seq511 Length=52245 Score = 131 bits (144), Expect = 4e-25 Identities = 138/182 (76%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||| |||||||| ||||||| || || || || || || | |||||||| ||||| Sbjct 19056 TTCTTTCTGGATATTGTAGTCGGACAGGGTACGGCCATCCTCAAGCTGTTTTCCAGCGAA 19115 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| ||||||||||| | ||||| || || |||||||| || || | || ||||| Sbjct 19116 GATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTT 19175 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||||| || || || || || ||||| ||||| ||||||| |||||||| Sbjct 19176 ATCGATGGTGTCGCTGGACTCAACCTCAAGGGTGATAGTCTTGCCGGTCAAGGTCTTGAC 19235 Query 288462 GA 288463 || Sbjct 19236 GA 19237 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| ||| || || || |||||||||| Sbjct 19322 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAA 19381 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || ||||| ||||| |||||||||||||| | ||| Sbjct 19382 AGGGTGCGGCCATCCTCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGGG 19441 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || |||||||| || | || || || || |||| |||||| || || || Sbjct 19442 ATGCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTATCGCTGGACTCGACC 19501 Query 288427 TCGAGCGTGATCGTCTTCCCGGT 288449 || || ||||| ||||| ||||| Sbjct 19502 TCAAGAGTGATGGTCTTGCCGGT 19524 Score = 114 bits (126), Expect = 3e-20 Identities = 168/234 (72%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | || || || |||| ||| || || ||||| || || || Sbjct 18562 TGACCACCCCGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCC 18621 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || ||||| || ||||| | || || || || ||||| ||||||||||| || Sbjct 18622 GAAAGGGTGCGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTG---GTCG 18678 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGA 288419 ||| || || || || |||||||| || ||| |||||||| || || | ||| || Sbjct 18679 GGGGGAATACCCTCCTTGTCCTGGATCTT-GCTCTTCACGTTGTCGATTGTGTCGGAGGA 18737 Query 288420 TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| | ||||| ||||| ||||||| |||||| ||||| |||||||| Sbjct 18738 CTCCACTTCCAATGTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 18791 >seq302 Length=110528 Score = 116 bits (128), Expect = 9e-21 Identities = 133/179 (74%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345 || ||||| || |||||| || ||||| || || || | || || || ||||||||| Sbjct 87377 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 87436 Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405 || |||||||| | ||||| || || || |||||||| || | || ||||| || Sbjct 87437 AGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 87496 Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || | |||||||| || || ||||| || || ||||| || ||||| ||||||||||| Sbjct 87497 ATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 87555 >seq381 Length=63781 Score = 96.9 bits (106), Expect = 8e-15 Identities = 158/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 269117 AAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGA 269176 |||||||| | ||||||| | || || || || |||| ||||| ||| | || ||| Sbjct 4925 AAGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTGCTCGGCATGAACGCCAAGCTGATGT 4984 Query 269177 ATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAAGTGT 269236 || || || || ||||| ||||| ||| || | || |||||| | |||| | Sbjct 4985 GCCAGTACATTGAGTTCGTCGCTGACCGTCTCCTGGTCGCTCTCGGTAACCAGAAGTACT 5044 Query 269237 ACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAACT 269296 |||| || || ||||||| ||| ||||| || || || | || ||||| |||| Sbjct 5045 ACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACT 5104 Query 269297 TCTTCGAAAAGCGTGTCAGCGACTATCA-ACGTCCTGGTGTAATG 269340 ||||||| ||||||||| | ||||| || | | || ||||| ||| Sbjct 5105 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCC-GGTGTTATG 5148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179639648421728