Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq381 111 2e-19
seq302 102 8e-17
>seq381
Length=63781
Score = 111 bits (122), Expect = 2e-19
Identities = 159/224 (71%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 52614 GAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGC 52673
||||| || | || || | ||||| | || | ||| || || || ||||| |||
Sbjct 4906 GAGGCTGTTGGAATTGAGCAAGAGTTCCTGACTGACGCTCTTCCTTGCGCTCTGCTCGGC 4965
Query 52674 ATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAG 52733
|||||||| || |||||| ||||||| ||||| || || || ||||| ||||
Sbjct 4966 ATGAACGCCAAGCTGATGTGCCAGTACATTGAGTTCGTCGCTGACCGTCTCCTGGTCGCT 5025
Query 52734 CTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCG 52793
||||| | | ||||||| |||| || ||| || || || || ||| | ||| ||
Sbjct 5026 CTCGGTAACCAGAAGTACTACAACTCTGCCAACCCCTTCGACTTCATGGAGTCCATCTCC 5085
Query 52794 CTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| | |||||||||||||| ||||||||||| ||||| || ||
Sbjct 5086 CTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTA 5129
>seq302
Length=110528
Score = 102 bits (112), Expect = 8e-17
Identities = 135/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Plus
Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484
|||| || |||||||||||||||| ||| || |||||||| || || || | |||
Sbjct 87375 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 87434
Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542
| || ||||||||||| || || ||||| || ||||| || | || || || | |||
Sbjct 87435 TCAGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTC-CTGGATCTTGGTCTTGACGTTG 87493
Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602
|| | ||||||| ||||||| || |||| || | || ||||| ||||| || || ||
Sbjct 87494 -TCGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGAC 87552
Query 138603 AAAA 138606
|||
Sbjct 87553 GAAA 87556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496256345598720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |