Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq511 123 6e-23
seq418 107 5e-18
seq302 89.7 1e-12
seq73 87.8 4e-12
>seq511
Length=52245
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || ||||| ||||| |||||||| |||| |||||| || | | ||
Sbjct 18571 CGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTG 18630
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||||||||||||||| || || ||||| |||||||| ||||| || ||| ||
Sbjct 18631 CGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCC 18690
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||||||| |||| ||||| | | || || |||||
Sbjct 18691 TCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAAT 18750
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || || | ||| || || || || ||
Sbjct 18751 GTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTG 18788
Score = 104 bits (114), Expect = 6e-17
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | |||||| | ||| || || || || || |||| |||||||| | || ||
Sbjct 19027 CGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGACAGGGTA 19086
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || ||||| ||||| ||||||||||||||||| ||||| ||| || ||
Sbjct 19087 CGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGGATGCCC 19146
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| ||| |||| |||||| | | || || || |
Sbjct 19147 TCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAACCTCAAGG 19206
Query 199589 GTGATCGTCTTACCCGT 199605
||||| ||||| || ||
Sbjct 19207 GTGATAGTCTTGCCGGT 19223
>seq418
Length=141009
Score = 107 bits (118), Expect = 5e-18
Identities = 172/247 (70%), Gaps = 0/247 (0%)
Strand=Plus/Minus
Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827
||||||||||||| |||||||| ||||| ||| | |||||| | | ||| | |
Sbjct 95784 GCGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCCTCGAGGATGGCATAC 95725
Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887
|| || | ||||| || | ||| | | | | || || || || || | ||| |||
Sbjct 95724 CACAGCTTCTGGGCCTTAATGGTGGAGCGGCCGCGGCCCTCCTTCTCATAACGCTCGTAG 95665
Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCGTCAAGACCGGGAGCTTCCTTCGGACAAAAG 167947
|| | ||||| || | ||||| | || |||| ||||| || || || || || ||
Sbjct 95664 AGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGGCCGGGGGCCTCGTTGGGGCAGAAT 95605
Query 167948 AGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCAAATCGCG 168007
||| |||| | ||||| || |||||| | ||||||||| || |||| ||||| | ||
Sbjct 95604 AGAGTCCAGTCTCCATTGGACTCGACACGCTTCATGAACAGATCGGGGGTCCACAGGGCA 95545
Query 168008 TAGAACA 168014
|||||||
Sbjct 95544 TAGAACA 95538
>seq302
Length=110528
Score = 89.7 bits (98), Expect = 1e-12
Identities = 129/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| ||||||||| || ||| | ||||| || |||||||| || |||||||
Sbjct 87375 CCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGA 87434
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| || ||||| ||||| || || || || ||||| ||||| ||| ||| |
Sbjct 87435 TCAGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 87494
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACAA 199619
||| |||||| | | || || || | || || ||||||||||| || || || || |
Sbjct 87495 CGATGGTGTCGCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 87554
Query 199620 AA 199621
||
Sbjct 87555 AA 87556
>seq73
Length=50798
Score = 87.8 bits (96), Expect = 4e-12
Identities = 80/101 (79%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| ||||| || ||||||||||| |||| ||||||||| | | || | || ||
Sbjct 32045 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCC 32104
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| || |||||||| |||||||| ||||| ||
Sbjct 32105 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGG 32145
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178906857585392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |