Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq418 138 1e-26
seq381 131 2e-24
seq275 123 3e-22
seq211 102 1e-15
>seq418
Length=141009
Score = 138 bits (152), Expect = 1e-26
Identities = 280/422 (66%), Gaps = 2/422 (0%)
Strand=Plus/Minus
Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCG-TCGTACCCAGGTTCTGCTGGTTG 1628220
||| || |||||||||||||||||||| | | | | ||||||||||||| |||||||
Sbjct 95858 ACTCGATGATCTCGGTGCACAGGTTGGA-GCTGCGGATGGTACCCAGGTTCTTCTGGTTG 95800
Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280
| || ||| |||||||||| ||||||| |||| || |||||| |||| |||
Sbjct 95799 CTCTTCTTGTTACAAGCGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCC 95740
Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNN 1628340
||| |||||| |||| | || | || | | | || |||||||||
Sbjct 95739 TCGAGGATGGCATACCACAGCTTCTGGGCCTTAATGGTGGAGCGGCCGCGGCCCTCCTTC 95680
Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400
|| || | |||||||| || |||||||| |||
Sbjct 95679 TCATAACGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGGCCGGGGGCC 95620
Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCA 1628460
||| || || || || | |||||| ||| || | | | || ||| || || ||
Sbjct 95619 TCGTTGGGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTTCATGAACAGATCG 95560
Query 1628461 CACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTT 1628520
|||||||| || || || ||||| || || ||| | |||||||| |||||||||||
Sbjct 95559 GGGGTCCACAGGGCATAGAACAGGTCACGGGCACGGATTTCCTCCTTACCGTGGTTCTTG 95500
Query 1628521 TTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCG 1628580
||||||||| | |||| | || |||||||| ||||| |||||| |||||||||
Sbjct 95499 CGGAGGTCGAGGAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCA 95440
Query 1628581 CC 1628582
||
Sbjct 95439 CC 95438
>seq381
Length=63781
Score = 131 bits (144), Expect = 2e-24
Identities = 184/255 (72%), Gaps = 5/255 (2%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || ||| |||||| |||||||||||||| | || |||||
Sbjct 5138 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 5079
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
||||||| | ||| ||||||| | ||||||| ||| | | ||||| | |
Sbjct 5078 GACTCCATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTACCGAGAGCGACC 5019
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA-- 868868
|| || ||||| ||||| ||||| |||||||||||||| || ||||||||||||||
Sbjct 5018 AGGAGACGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGC 4959
Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928
|||||| | || || | || ||| ||||||| ||| || | || ||||| || |
Sbjct 4958 AGAGCGCAA--GGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAA 4901
Query 868929 TGATCTGCCTGGGCA 868943
|||| | ||||| ||
Sbjct 4900 TGATGT-CCTGGACA 4887
Score = 104 bits (114), Expect = 3e-16
Identities = 180/256 (70%), Gaps = 7/256 (3%)
Strand=Plus/Minus
Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCC 869269
|||| || ||||||||||| || |||||||||||||| ||||| | | |||| |||
Sbjct 4793 AAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCA 4734
Query 869270 GAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGG 869329
||||| ||||| ||||||||||| || ||| | | ||| || |||||| || ||
Sbjct 4733 GAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAG--GTAGAAT 4676
Query 869330 C-CCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGT 869388
| | |||| |||||| || ||||| |||||||| | | | | || | ||
Sbjct 4675 CACGGTCTTG--GATCCAGCGGATGGCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGT 4618
Query 869389 GTCGATGGCGCGAAAGAGGT-GGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCA 869447
|| ||||| ||||||| ||| | || | || ||||||| ||||| ||||| |
Sbjct 4617 TTCAATGGCATCGAAGAGGTAGGTGCGTTGC-TTGGGCTCCTTGATGTAGGTATCGATAA 4559
Query 869448 GGAGCGAATAGGTCTC 869463
| || || ||||||||
Sbjct 4558 GAAGGGAGTAGGTCTC 4543
>seq275
Length=133064
Score = 123 bits (136), Expect = 3e-22
Identities = 92/108 (85%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|||||||||||||| || |||||| |||| | ||| |||| |||||| |||| || ||
Sbjct 112686 GCCGCCAACTACCTTGATATCAAGGCTCTCTTGGATGTTGGATGCAAGACTGTCGCAAAT 112627
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293
||||||||||||||||| |||||||||||||| ||||| || ||||||
Sbjct 112626 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGTAAGACATTCAACATC 112579
>seq211
Length=151517
Score = 102 bits (112), Expect = 1e-15
Identities = 110/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| ||||| || || ||||| |||||||| || | |||||||| |||
Sbjct 32370 GACAGCATCGGTGGCACCGTAACCTGCGTAATCCGCAACGTCCCTGTCGGCCTCGGTGAG 32311
Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166
|| ||||| || || | || || |||| |||||||||||| ||||| ||||||
Sbjct 32310 CCCTGCTTCGATAAACTTGAAGCAAAACTCGGCCACGCCATGCTCAGCATCCCCGCCACC 32251
Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192
||||| ||||| || ||| ||| ||
Sbjct 32250 AAGGGCTTCGAAATCGGCTCCGGCTT 32225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107059104869392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |