Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19] 976 sequences; 31,529,786 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq418 138 1e-26 seq381 131 2e-24 seq275 123 3e-22 seq211 102 1e-15 >seq418 Length=141009 Score = 138 bits (152), Expect = 1e-26 Identities = 280/422 (66%), Gaps = 2/422 (0%) Strand=Plus/Minus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCG-TCGTACCCAGGTTCTGCTGGTTG 1628220 ||| || |||||||||||||||||||| | | | | ||||||||||||| ||||||| Sbjct 95858 ACTCGATGATCTCGGTGCACAGGTTGGA-GCTGCGGATGGTACCCAGGTTCTTCTGGTTG 95800 Query 1628221 GTGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCC 1628280 | || ||| |||||||||| ||||||| |||| || |||||| |||| ||| Sbjct 95799 CTCTTCTTGTTACAAGCGTCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGAGCC 95740 Query 1628281 GCGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNN 1628340 ||| |||||| |||| | || | || | | | || ||||||||| Sbjct 95739 TCGAGGATGGCATACCACAGCTTCTGGGCCTTAATGGTGGAGCGGCCGCGGCCCTCCTTC 95680 Query 1628341 NNNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCC 1628400 || || | |||||||| || |||||||| ||| Sbjct 95679 TCATAACGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCAAGGCCGGGGGCC 95620 Query 1628401 TCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCA 1628460 ||| || || || || | |||||| ||| || | | | || ||| || || || Sbjct 95619 TCGTTGGGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTTCATGAACAGATCG 95560 Query 1628461 CACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTT 1628520 |||||||| || || || ||||| || || ||| | |||||||| ||||||||||| Sbjct 95559 GGGGTCCACAGGGCATAGAACAGGTCACGGGCACGGATTTCCTCCTTACCGTGGTTCTTG 95500 Query 1628521 TTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCG 1628580 ||||||||| | |||| | || |||||||| ||||| |||||| ||||||||| Sbjct 95499 CGGAGGTCGAGGAACTCGAAGACATCCGCGTGCCATGGCTCAAGGTAGATGGCAAAGGCA 95440 Query 1628581 CC 1628582 || Sbjct 95439 CC 95438 >seq381 Length=63781 Score = 131 bits (144), Expect = 2e-24 Identities = 184/255 (72%), Gaps = 5/255 (2%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || || || ||| |||||| |||||||||||||| | || ||||| Sbjct 5138 GCCTTCTGGTAGTCACCGACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATG 5079 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 ||||||| | ||| ||||||| | ||||||| ||| | | ||||| | | Sbjct 5078 GACTCCATGAAGTCGAAGGGGTTGGCAGAGTTGTAGTACTTCTGGTTACCGAGAGCGACC 5019 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGA-- 868868 || || ||||| ||||| ||||| |||||||||||||| || |||||||||||||| Sbjct 5018 AGGAGACGGTCAGCGACGAACTCAATGTACTGGCACATCAGCTTGGCGTTCATGCCGAGC 4959 Query 868869 TGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGA 868928 |||||| | || || | || ||| ||||||| ||| || | || ||||| || | Sbjct 4958 AGAGCGCAA--GGAAGAGCGTCAGTCAGGAACTCTTGCTCAATTCCAACAGCCTCAACAA 4901 Query 868929 TGATCTGCCTGGGCA 868943 |||| | ||||| || Sbjct 4900 TGATGT-CCTGGACA 4887 Score = 104 bits (114), Expect = 3e-16 Identities = 180/256 (70%), Gaps = 7/256 (3%) Strand=Plus/Minus Query 869210 AAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCC 869269 |||| || ||||||||||| || |||||||||||||| ||||| | | |||| ||| Sbjct 4793 AAGGTCAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAAGAGCCA 4734 Query 869270 GAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGG 869329 ||||| ||||| ||||||||||| || ||| | | ||| || |||||| || || Sbjct 4733 GAGAAGAAGATACCCTCGACGGCAGCGAAGGCAACGAGACGGGAAGCAAAG--GTAGAAT 4676 Query 869330 C-CCTCCTTGTTGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGT 869388 | | |||| |||||| || ||||| |||||||| | | | | || | || Sbjct 4675 CACGGTCTTG--GATCCAGCGGATGGCCCAATCGGCCTTGCGCTTGATGCAGGGAATGGT 4618 Query 869389 GTCGATGGCGCGAAAGAGGT-GGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCA 869447 || ||||| ||||||| ||| | || | || ||||||| ||||| ||||| | Sbjct 4617 TTCAATGGCATCGAAGAGGTAGGTGCGTTGC-TTGGGCTCCTTGATGTAGGTATCGATAA 4559 Query 869448 GGAGCGAATAGGTCTC 869463 | || || |||||||| Sbjct 4558 GAAGGGAGTAGGTCTC 4543 >seq275 Length=133064 Score = 123 bits (136), Expect = 3e-22 Identities = 92/108 (85%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 |||||||||||||| || |||||| |||| | ||| |||| |||||| |||| || || Sbjct 112686 GCCGCCAACTACCTTGATATCAAGGCTCTCTTGGATGTTGGATGCAAGACTGTCGCAAAT 112627 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATC 1592293 ||||||||||||||||| |||||||||||||| ||||| || |||||| Sbjct 112626 ATGATCAAGGGCAAGTCCCCCGAGGAGATCCGTAAGACATTCAACATC 112579 >seq211 Length=151517 Score = 102 bits (112), Expect = 1e-15 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| ||||| || || ||||| |||||||| || | |||||||| ||| Sbjct 32370 GACAGCATCGGTGGCACCGTAACCTGCGTAATCCGCAACGTCCCTGTCGGCCTCGGTGAG 32311 Query 19107 CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACC 19166 || ||||| || || | || || |||| |||||||||||| ||||| |||||| Sbjct 32310 CCCTGCTTCGATAAACTTGAAGCAAAACTCGGCCACGCCATGCTCAGCATCCCCGCCACC 32251 Query 19167 AAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| ||||| || ||| ||| || Sbjct 32250 AAGGGCTTCGAAATCGGCTCCGGCTT 32225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107059104869392