Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq511 118 1e-21
>seq511
Length=52245
Score = 118 bits (130), Expect = 1e-21
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| |||| || | ||||| || || || || | ||||| || || ||
Sbjct 18791 ATGCAGATCTTCGTTAAGACTTTGACCGGCAAGACCATCACATTGGAAGTGGAGTCCTCC 18732
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || |||||||| ||||| || || || || ||||| |||
Sbjct 18731 GACACAATCGACAACGTGAAGAGCAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAA 18672
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | |||||||| || || |||||||| ||| | | | | || ||||| |||
Sbjct 18671 CAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAAGATGGCCGCACCCTTTCGGATTACAAC 18612
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| || || || ||| |||||
Sbjct 18611 ATCCAGAAGGAGTCCACTCTTCACCTGGTG 18582
Score = 105 bits (116), Expect = 6e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 24728 ACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAA 24787
||||| || || || || || || || || ||| ||| || | || | || ||
Sbjct 19524 ACCGGCAAGACCATCACTCTTGAGGTCGAGTCCAGCGATACTATCGACAATGTCAAGTCC 19465
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|||||||| ||||| ||||| || ||||| || ||||| ||| |||| || || || ||
Sbjct 19464 AAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAACAGCGTCTGATTTTCGCTGGAAAG 19405
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||| |||||||| | | | | || || ||||||||||| |||||||| || || |||
Sbjct 19404 CAGTTGGAGGATGGCCGCACCCTTTCCGACTATAACATTCAGAAGGAATCCACCCTCCAC 19345
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
|||| |||| |||| || ||
Sbjct 19344 CTGGTCCTGCGCCTGCGTGGTGG 19322
Score = 102 bits (112), Expect = 7e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| |||| || || ||||| || ||||| || | || || ||| | |
Sbjct 19019 ATGCAGATCTTTGTTAAGACTCTCACCGGCAAGACTATCACTTTGGAGGTTGAATCATCA 18960
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||||||||| || || || || || || || |||
Sbjct 18959 GACACGATTGATAATGTGAAGAGCAAGATCCAAGATAAGGAGGGTATCCCCCCTGACCAA 18900
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| | || || ||||| || || || || ||| | | | | || || || |||
Sbjct 18899 CAACGTCTAATTTTCGCCGGCAAGCAACTTGAAGATGGCCGCACCCTTTCCGACTACAAC 18840
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
|| || ||||| || ||| | ||||||||
Sbjct 18839 ATCCAGAAGGAGTCTACATTGCACTTGGT 18811
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449892111249280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |