Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19] 976 sequences; 31,529,786 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq511 147 4e-30 >seq511 Length=52245 Score = 147 bits (162), Expect = 4e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| ||||| ||||||| ||||| || ||||| || || || || | Sbjct 18791 TACCACCACGAAGACGGAGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAGTCGG 18850 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || ||||| ||||| || || || || ||||| | |||||| || || | Sbjct 18851 AAAGGGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAAATTAGACGTTGTTGGTCAGGGG 18910 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || || ||||||||||| ||| ||||| || ||||| |||||||| || | ||| Sbjct 18911 GGATACCCTCCTTATCTTGGATC-TTGCTCTTCACATTATCAATCGTGTCTGATGATTCA 18969 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||||||| || |||||||| || | ||||| ||||| |||||||| Sbjct 18970 ACCTCCAAAGTGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 19019 Score = 134 bits (148), Expect = 3e-26 Identities = 160/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || |||||| || ||||| || |||||||||||||| ||||| || || | Sbjct 19019 TACCACCACGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGG 19078 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || || || || ||||||||||| ||||| || | ||||| || |||| Sbjct 19079 ACAGGGTACGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAG 19138 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || |||||||| |||||||| | || || || || || || || | | || | Sbjct 19139 GGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAA 19198 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798 | || | || || |||||||| ||||| ||||| || Sbjct 19199 CCTCAAGGGTGATAGTCTTGCCGGTCAAGGTCTTGAC 19235 Score = 118 bits (130), Expect = 2e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| ||||| || || ||||| || || ||||| || || | | || Sbjct 18576 ACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCC 18635 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||||| || || || ||||||||||| || | ||||| || || || || || ||||| Sbjct 18636 ATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCCTCCTT 18695 Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773 || || ||| ||||| || || || || || || || | || |||||||| || | Sbjct 18696 GTCCTGGATC-TTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAATGTGA 18754 Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||||||| ||||| ||||| || || |||||||| Sbjct 18755 TGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 18791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981814922250864