Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq511 147 4e-30
>seq511
Length=52245
Score = 147 bits (162), Expect = 4e-30
Identities = 172/230 (75%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| ||||| ||||||| ||||| || ||||| || || || || |
Sbjct 18791 TACCACCACGAAGACGGAGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAGTCGG 18850
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || ||||| ||||| || || || || ||||| | |||||| || || |
Sbjct 18851 AAAGGGTGCGGCCATCTTCAAGTTGCTTGCCGGCGAAAATTAGACGTTGTTGGTCAGGGG 18910
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760
| || || ||||||||||| ||| ||||| || ||||| |||||||| || | |||
Sbjct 18911 GGATACCCTCCTTATCTTGGATC-TTGCTCTTCACATTATCAATCGTGTCTGATGATTCA 18969
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| |||||||| || |||||||| || | ||||| ||||| ||||||||
Sbjct 18970 ACCTCCAAAGTGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 19019
Score = 134 bits (148), Expect = 3e-26
Identities = 160/217 (74%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | || |||||| || ||||| || |||||||||||||| ||||| || || |
Sbjct 19019 TACCACCACGCAGACGCAGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGG 19078
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | || || || || ||||||||||| ||||| || | ||||| || ||||
Sbjct 19079 ACAGGGTACGGCCATCCTCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAG 19138
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || |||||||| |||||||| | || || || || || || || | | || |
Sbjct 19139 GGATGCCCTCCTTATCCTGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAA 19198
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTAC 82798
| || | || || |||||||| ||||| ||||| ||
Sbjct 19199 CCTCAAGGGTGATAGTCTTGCCGGTCAAGGTCTTGAC 19235
Score = 118 bits (130), Expect = 2e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || | ||| ||||| || || ||||| || || ||||| || || | | ||
Sbjct 18576 ACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCC 18635
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
||||| || || || ||||||||||| || | ||||| || || || || || |||||
Sbjct 18636 ATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCCTCCTT 18695
Query 82715 ATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTA 82773
|| || ||| ||||| || || || || || || || | || |||||||| || |
Sbjct 18696 GTCCTGGATC-TTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAATGTGA 18754
Query 82774 TCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||||||| ||||| ||||| || || ||||||||
Sbjct 18755 TGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 18791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981814922250864
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |