Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20citrinum_20[genbank_20GCA_5F001399475.1_202015-10-19]
976 sequences; 31,529,786 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq511 192 1e-43
seq302 127 5e-24
seq73 102 2e-16
seq418 96.9 8e-15
>seq511
Length=52245
Score = 192 bits (212), Expect = 1e-43
Identities = 175/221 (79%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
||||| | || || ||||||||||||||||| || |||||||| ||||||| ||||||
Sbjct 18571 CGAAGACGGAGCACCAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGAAAGGGTG 18630
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| ||||||||||||||||| || || |||||||| || |||||||| || |||| ||
Sbjct 18631 CGGCCATCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGTTGGTCGGGGGGAATACCC 18690
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
||||||||||||||||| |||||||| ||||| ||||| ||| || || || |
Sbjct 18691 TCCTTGTCCTGGATCTTGCTCTTCACGTTGTCGATTGTGTCGGAGGACTCCACTTCCAAT 18750
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || || | |||||| || || | ||||||
Sbjct 18751 GTGATGGTCTTGCCGGTCAAAGTCTTAACGAAGATCTGCAT 18791
Score = 167 bits (184), Expect = 5e-36
Identities = 170/222 (77%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | || || | ||| | || ||||| || |||||||| || || | ||||||
Sbjct 18798 ACGAAGACGGAGAACCAAGTGCAATGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGGGT 18857
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| |||||||| || |||||||| ||||| || || |||||||||||||| || | ||
Sbjct 18858 GCGGCCATCTTCAAGTTGCTTGCCGGCGAAAATTAGACGTTGTTGGTCAGGGGGGATACC 18917
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
||||| || |||||||| ||||| || || || ||||| || ||||||||| |
Sbjct 18918 CTCCTTATCTTGGATCTTGCTCTTCACATTATCAATCGTGTCTGATGATTCAACCTCCAA 18977
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||| ||||| || ||||||||||| ||||| | ||||||
Sbjct 18978 AGTGATAGTCTTGCCGGTGAGAGTCTTAACAAAGATCTGCAT 19019
Score = 145 bits (160), Expect = 2e-29
Identities = 146/190 (77%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| ||||| || ||||| || || || |||||||| || | |||||| | |||||
Sbjct 19337 AGGACCAGGTGGAGGGTGGATTCCTTCTGAATGTTATAGTCGGAAAGGGTGCGGCCATCC 19396
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| |||||| || ||||| || || || |||||||||||||| | ||||||||||||
Sbjct 19397 TCCAACTGCTTTCCAGCGAAAATCAGACGCTGTTGGTCAGGAGGGATGCCTTCCTTGTCC 19456
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || || || ||||| || || | || ||||| |||||||| |||
Sbjct 19457 TGGATCTTGGACTTGACATTGTCGATAGTATCGCTGGACTCGACCTCAAGAGTGATGGTC 19516
Query 211083 TTTCCCGTGA 211092
|| || ||||
Sbjct 19517 TTGCCGGTGA 19526
Score = 136 bits (150), Expect = 9e-27
Identities = 150/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| | |||||| || || ||||| ||||| || || || | ||||| | |||||
Sbjct 19036 AGGACCAAGTGAAGGGTAGATTCTTTCTGGATATTGTAGTCGGACAGGGTACGGCCATCC 19095
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| ||||| || || |||||||| || || |||||||||||||| | || ||||| |||
Sbjct 19096 TCAAGCTGTTTTCCAGCGAAGATGAGACGCTGTTGGTCAGGAGGGATGCCCTCCTTATCC 19155
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|| ||||| || ||||| ||||||||||| | |||||||| || ||||| |||
Sbjct 19156 TGAATCTTGGACTTGACGTTATCGATGGTGTCGCTGGACTCAACCTCAAGGGTGATAGTC 19215
Query 211083 TTTCCCGTGAGAGTCTTTAC 211102
|| || || | ||||| ||
Sbjct 19216 TTGCCGGTCAAGGTCTTGAC 19235
>seq302
Length=110528
Score = 127 bits (140), Expect = 5e-24
Identities = 138/182 (76%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
|| |||||||| || || || || | ||||| || ||||||||||| ||||||||
Sbjct 87377 TTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 87436
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
||||| ||||||||||| || | || ||||||||||||||||| || ||||| |||
Sbjct 87437 AGGCGCTGTTGGTCAGGGGGGATACCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 87496
Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103
|||||||| ||| || || ||||| || || ||||| ||||| || ||||| ||
Sbjct 87497 ATGGTGTC---GCTCGACTCGACGTCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 87553
Query 211104 AA 211105
||
Sbjct 87554 AA 87555
>seq73
Length=50798
Score = 102 bits (112), Expect = 2e-16
Identities = 94/119 (79%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
||||| |||||||| || ||||| || |||||||| || |||| ||||| | || ||
Sbjct 32045 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTACGACCGTCC 32104
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021
|| |||||||| || |||||||| || || ||||||||||| || | || ||||||||
Sbjct 32105 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGTTGGTCAGGGGGGATACCCTCCTTGTC 32163
>seq418
Length=141009
Score = 96.9 bits (106), Expect = 8e-15
Identities = 185/273 (68%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 178093 GTTCTTTTGGTTGCTCTTTCTGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCCCAC 178152
|||||| ||||||||||| || | || || ||||| |||||||| | ||
Sbjct 95812 GTTCTTCTGGTTGCTCTTCTTGTTACAAGCGTCCTTGTAGAGCATGAAGGGGTTACCAGT 95753
Query 178153 CTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTTGGC 178212
||| | |||||| |||| ||| || ||| |||| |||||| | || | |
Sbjct 95752 CTCGGTCTGAGCCTCGAGGATGGCATACCACAGCTTCTGGGCCTTAATGGTGGAGCGGCC 95693
Query 178213 TTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATCATC 178272
|| || ||||| || | |||||| ||||||| || || ||||||||| |
Sbjct 95692 GCGGCCCTCCTTCTCATAACGCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGC 95633
Query 178273 GAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCGTTT 178332
|| ||||| ||||| ||||||||||| ||| |||| | || | || || || ||
Sbjct 95632 AAGGCCGGGGGCCTCGTTGGGGCAGAATAGAGTCCAGTCTCCATTGGACTCGACACGCTT 95573
Query 178333 CATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
|||||| || || | |||||| | |||||||||
Sbjct 95572 CATGAACAGATCGGGGGTCCACAGGGCATAGAA 95540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159137504804240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |